Curated BLAST for Genomes

 

Curated BLAST

Searching in Geobacter metallireducens GS-15 (GCF_000012925.1)

Found 3 curated entries in PaperBLAST's database that match 'anthranilate synthase component II' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Geobacter metallireducens GS-15, or try another query

GMET_RS12560 Gmet_2496 WP_004514650.1: aminodeoxychorismate/anthranilate synthase component II
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

64% id,
97% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

58% id,
97% cov

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

44% id,
99% cov

carA GMET_RS08910 Gmet_1771 WP_004513332.1: glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
is similar to:
PaperBLAST

trpG / BAC65123.1: anthranilate synthase component II from Burkholderia multivorans

33% id,
92% cov

trpG / AAD09117.1: anthranilate synthase component II from Rhodobacter sphaeroides

32% id,
92% cov

guaA GMET_RS11555 Gmet_2292 WP_004514506.1: glutamine-hydrolyzing GMP synthase
is similar to:
PaperBLAST

trpG: anthranilate synthase component II; EC 4.1.3.27 from Leptospira biflexa

28% id,
100% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory