Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurimonas denitrificans DSM 1251 (GCF_000012965.1)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Sulfurimonas denitrificans DSM 1251, or try another query

SUDEN_RS05945 Suden_1134 WP_011372764.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 50% id,
99% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 50% id,
99% cov

Q8YMS6: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 50% id,
99% cov

More...

SUDEN_RS09745 Suden_1877 WP_011373491.1: branched-chain amino acid transaminase
is similar to:		 PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli
ilvE / P0AB80: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

 43% id,
98% cov

SUDEN_RS09890 Suden_1905 WP_011373519.1: LL-diaminopimelate aminotransferase
is similar to:		 PaperBLAST

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 41% id,
98% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 33% id,
100% cov

AAT_SYNY3 / Q55128: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Synechocystis sp.

 29% id,
98% cov

More...

hisC SUDEN_RS02470 Suden_0471 WP_011372106.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

 36% id,
100% cov

Q8YUK5: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 22% id,
83% cov

SUDEN_RS00385 Suden_0073 WP_011371709.1: alanine--glyoxylate aminotransferase family protein
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 34% id,
93% cov

SUDEN_RS03970 Suden_0759 WP_011372391.1: succinyldiaminopimelate transaminase
is similar to:		 PaperBLAST

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 27% id,
90% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

 26% id,
91% cov

Q8YTF2: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

 25% id,
93% cov

More...

SUDEN_RS02515 Suden_0481 WP_011372115.1: PatB family C-S lyase
is similar to:		 PaperBLAST

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

 24% id,
92% cov

AAT_THEMA / Q9X0Y2: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Thermotoga maritima

 24% id,
92% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 24% id,
91% cov

More...

SUDEN_RS10425 Suden_2008 WP_011373622.1: NifS family cysteine desulfurase
is similar to:		 PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

 25% id,
51% cov

SUDEN_RS04740 Suden_0902 WP_011372532.1: DegT/DnrJ/EryC1/StrS family aminotransferase
is similar to:		 PaperBLAST

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

 23% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory