Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurimonas denitrificans DSM 1251 (GCF_000012965.1)

Found 5 curated entries in PaperBLAST's database that match '2.6.1.36' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Sulfurimonas denitrificans DSM 1251, or try another query

SUDEN_RS06570 Suden_1254 WP_011372884.1: aspartate aminotransferase family protein
is similar to:
PaperBLAST

ORNAT_THEKO / Q5JEW1: Ornithine aminotransferase; Orn-AT; Lysine aminotransferase; Lys-AT; EC 2.6.1.13; EC 2.6.1.36 from Thermococcus kodakarensis

33% id,
87% cov

A4F7V1: L-lysine 6-transaminase (EC 2.6.1.36) from Saccharopolyspora erythraea

24% id,
92% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

24% id,
90% cov

More...

hemL SUDEN_RS05820 Suden_1109 WP_011372739.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

25% id,
83% cov

CA265_RS14455: L-lysine 6-transaminase (EC 2.6.1.36) from Pedobacter sp.

24% id,
81% cov

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

25% id,
78% cov

More...

SUDEN_RS06750 Suden_1290 WP_011372920.1: adenosylmethionine--8-amino-7-oxononanoate transaminase
is similar to:
PaperBLAST

P9WQ77: L-lysine 6-transaminase (EC 2.6.1.36) from Mycobacterium tuberculosis

24% id,
76% cov

SUDEN_RS03140 Suden_0601 WP_011372234.1: glutamate-1-semialdehyde 2,1-aminomutase
is similar to:
PaperBLAST

lat / Q01767: lysine ε-aminotransferase (EC 2.6.1.36) from Streptomyces clavuligerus

24% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory