Curated BLAST for Genomes

 

Curated BLAST

Searching in Sulfurimonas denitrificans DSM 1251 (GCF_000012965.1)

Found 22 curated entries in PaperBLAST's database that match '2.7.2.11' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Sulfurimonas denitrificans DSM 1251, or try another query

proB SUDEN_RS08770 Suden_1684 WP_011373302.1: glutamate 5-kinase
is similar to:		 PaperBLAST

proB: glutamate 5-kinase; EC 2.7.2.11 from Campylobacter jejuni

 51% id,
100% cov

G5K_LEIDO / A0A0R6Y3I5: Glutamate 5-kinase; LdG5K; Gamma-glutamyl kinase; EC 2.7.2.11 from Leishmania donovani
A0A0R6Y3I5: glutamate 5-kinase (EC 2.7.2.11) from Leishmania donovani

 50% id,
97% cov

Q6E235: glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis

 41% id,
66% cov

More...

proB SUDEN_RS07385 Suden_1413 WP_011373042.1: glutamate 5-kinase
is similar to:		 PaperBLAST

proB: glutamate 5-kinase; EC 2.7.2.11 from Campylobacter jejuni

 47% id,
100% cov

G5K_LEIDO / A0A0R6Y3I5: Glutamate 5-kinase; LdG5K; Gamma-glutamyl kinase; EC 2.7.2.11 from Leishmania donovani
A0A0R6Y3I5: glutamate 5-kinase (EC 2.7.2.11) from Leishmania donovani

 49% id,
95% cov

BT3719: glutamate 5-kinase (EC 2.7.2.11) from Bacteroides thetaiotaomicron

 36% id,
71% cov

More...

SUDEN_RS04170 Suden_0792 WP_011372424.1: glutamate-5-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

 38% id,
56% cov

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

 38% id,
56% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

 37% id,
54% cov

More...

SUDEN_RS08595 Suden_1650 WP_011373268.1: aspartate kinase
is similar to:		 PaperBLAST

Q6E235: glutamate 5-kinase (EC 2.7.2.11) from Bacillus subtilis

 22% id,
65% cov

pyrH SUDEN_RS03760 Suden_0717 WP_011372350.1: UMP kinase
is similar to:		 PaperBLAST

P9WHU9: glutamate 5-kinase (EC 2.7.2.11) from Mycobacterium tuberculosis

 23% id,
50% cov

proB: glutamate 5-kinase; EC 2.7.2.11 from Campylobacter jejuni

 23% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

738529-739251 (frame +1) on NC_007575.1 Sulfurimonas denitrificans DSM 1251, complete sequence
is similar to:		 PaperBLAST

P9WHU9: glutamate 5-kinase (EC 2.7.2.11) from Mycobacterium tuberculosis
Also see hits to annotated proteins above

 23% id,
52% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory