Searching in Rhodospirillum rubrum ATCC 11170 (GCF_000013085.1)
Found 35 curated entries in PaperBLAST's database that match '1.1.1.3' as complete word(s).
These curated entries have 29 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Rhodospirillum rubrum ATCC 11170, or try another query
| RRU_RS12480 Rru_A2410 WP_011390163.1: homoserine dehydrogenase is similar to: | PaperBLAST |
Ga0059261_2711: homoserine dehydrogenase (EC 1.1.1.3) from Sphingomonas koreensis | 55% id, 99% cov |
DHOM_NEIG1 / Q5F8J4: NAD(+)-dependent homoserine dehydrogenase; NAD(+)-dependent HSD; NgHSD; EC 1.1.1.3 from Neisseria gonorrhoeae | 46% id, 99% cov |
DvMF_1412: homoserine dehydrogenase (EC 1.1.1.3) from Desulfovibrio vulgaris | 43% id, 97% cov |
| RRU_RS03870 Rru_A0743 WP_011388501.1: aspartate kinase is similar to: | PaperBLAST |
Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima | 40% id, 54% cov |
ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 32% id, 45% cov |
Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis | 32% id, 42% cov |
| proB RRU_RS06475 Rru_A1239 WP_011388994.1: glutamate 5-kinase is similar to: | PaperBLAST |
Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima | 26% id, 26% cov |
ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 24% id, 25% cov |
| pyrH RRU_RS08240 Rru_A1588 WP_011389463.1: UMP kinase is similar to: | PaperBLAST |
AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana | 24% id, 19% cov |
AKH2_ARATH / O81852: Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana | 30% id, 13% cov |
O63067: homoserine dehydrogenase (EC 1.1.1.3) from Glycine max | 31% id, 12% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 868453-869877 (frame +1) on NC_007643.1 Rhodospirillum rubrum ATCC 11170, complete sequence is similar to: | PaperBLAST |
Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima | 36% id, 65% cov |
| 1461957-1463183 (frame -1) on NC_007643.1 Rhodospirillum rubrum ATCC 11170, complete sequence is similar to: | PaperBLAST |
ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 24% id, 32% cov |
Lawrence Berkeley National Laboratory