Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Rhodospirillum rubrum ATCC 11170 (GCF_000013085.1)

Found 60 curated entries in PaperBLAST's database that match '1.1.1.85' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Rhodospirillum rubrum ATCC 11170, or try another query

leuB RRU_RS06235 Rru_A1191 WP_011388946.1: 3-isopropylmalate dehydrogenase is similar to:	PaperBLAST
P24404: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Agrobacterium tumefaciens	62% id, 99% cov
LEU3_ACIFR / Q56268: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Acidithiobacillus ferrooxidans Q56268: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Acidithiobacillus ferrooxidans	59% id, 98% cov
Q00412: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arthrospira platensis	54% id, 99% cov
LEU3_HEYCO / P12010: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Heyndrickxia coagulans	52% id, 98% cov
P24098: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus aquaticus	52% id, 96% cov
P61495: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus	51% id, 96% cov
P61494: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus	51% id, 96% cov
LEU3_THET8 / Q5SIY4: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Thermus thermophilus Q5SIY4: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Thermus thermophilus	51% id, 96% cov
P29102: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Brassica napus	56% id, 89% cov
P31958: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Clostridium pasteurianum	50% id, 99% cov
LEU33_ARATH / Q9SA14: 3-isopropylmalate dehydrogenase 3, chloroplastic; 3-IPM-DH 3; AtIMDH2; AtIMDH3; IMDH 3; Beta-IPM dehydrogenase 3; Isopropylmalate dehydrogenase 3; AtIMD3; EC 1.1.1.85 from Arabidopsis thaliana Q9SA14: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana	55% id, 89% cov
P43860: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Haemophilus influenzae	49% id, 98% cov
LEU32_ARATH / P93832: 3-isopropylmalate dehydrogenase 2, chloroplastic; 3-IPM-DH 2; AtIMDH2; AtIMDH3; IMDH 2; Beta-IPM dehydrogenase 2; Isopropylmalate dehydrogenase 2; AtIMD2; EC 1.1.1.85 from Arabidopsis thaliana P93832: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana	54% id, 89% cov
LEU31_ARATH / Q9FMT1: 3-isopropylmalate dehydrogenase 1, chloroplastic; 3-IPM-DH 1; AtIMDH1; IMDH 1; Beta-IPM dehydrogenase 1; Isopropylmalate dehydrogenase 1; AtIMD1; Methylthioalkylmalate dehydrogenase 1; EC 1.1.1.85 from Arabidopsis thaliana IMDH3 / Q9FMT1: isopropylmalate dehydrogenase 3 (EC 1.1.1.85) from Arabidopsis thaliana Q9FMT1: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Arabidopsis thaliana	54% id, 88% cov
LEU3_SALTY / P37412: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Salmonella typhimurium P37412: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Salmonella enterica	47% id, 99% cov
LEU3_ECOLI / P30125: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Escherichia coli LeuB / b0073: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli leuB / P30125: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli P30125: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Escherichia coli	47% id, 99% cov
leuB / P24015: β-isopropylmalate dehydrogenase subunit (EC 1.1.1.85) from Leptospira interrogans P24015: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Leptospira interrogans	47% id, 99% cov
D2YZL2: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella benthica	46% id, 99% cov
Q8E9N3: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella oneidensis	46% id, 98% cov
P87256: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Aspergillus niger	44% id, 99% cov
P96197: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Azotobacter vinelandii	62% id, 71% cov
Q9Y897: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Zymoseptoria tritici	44% id, 99% cov
P34733: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Ogataea angusta	43% id, 99% cov
S2J6B8: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Mucor circinelloides	43% id, 99% cov
AMT6_ALTAL / C9K7B7: 3-isopropylmalate dehydrogenase AMT6; AM-toxin biosynthesis protein 6; EC 1.1.1.85 from Alternaria alternata	42% id, 99% cov
GLOI_GLAL2 / S3DB74: 3-isopropylmalate dehydrogenase gloI; L-homotyrosine biosynthesis sub-cluster protein gloI; Pneumocandin biosynthesis cluster protein I; EC 1.1.1.85 from Glarea lozoyensis	43% id, 97% cov
P08791: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Cyberlindnera jadinii	41% id, 99% cov
O94114: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Scheffersomyces stipitis	42% id, 98% cov
O60027: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Eremothecium gossypii	43% id, 95% cov
P54354: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Bacteroides fragilis	42% id, 96% cov
Q01987: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from [Candida] boidinii	41% id, 99% cov
LEU2 / P04173: 3-isopropylmalate dehydrogenase monomer (EC 1.1.1.85) from Saccharomyces cerevisiae	41% id, 99% cov
leu1 / RF\|NP_595804.2: 3-isopropylmalate dehydrogenase Leu1; EC 1.1.1.85 from Schizosaccharomyces pombe	43% id, 94% cov
Q6PY58: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Kazachstania humilis	40% id, 100% cov
HTYC_ASPRU / K0E689: Isopropyl malate dehydrogenase htyC; L-homotyrosine biosynthetic cluster protein C; EC 1.1.1.85 from Aspergillus rugulosus	41% id, 96% cov
P07139: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Candida maltosa	41% id, 98% cov
LEU2: 3-isopropylmalate dehydrogenase; EC 1.1.1.85 from Candida albicans	40% id, 98% cov
LEU3_HALVD / D4GYE8: 3-isopropylmalate dehydrogenase; EC 1.1.1.85 from Haloferax volcanii	38% id, 100% cov
P94929: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Mycobacterium tuberculosis	39% id, 97% cov
LEU3_MYCTU / P9WKK9: 3-isopropylmalate dehydrogenase; 3-IPM-DH; Beta-IPM dehydrogenase; IMDH; EC 1.1.1.85 from Mycobacterium tuberculosis	39% id, 97% cov
LEU3_METJA / Q58130: 3-isopropylmalate/3-methylmalate dehydrogenase; 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; IPMDH; Beta-IPM dehydrogenase; D-malate dehydrogenase [decarboxylating]; EC 1.1.1.85; EC 1.1.1.n5; EC 1.1.1.83 from Methanocaldococcus jannaschii MJ0720 / Q58130: 3-isopropylmalate dehydrogenase subunit (EC 1.1.1.85) from Methanocaldococcus jannaschii	38% id, 93% cov
hphB / B2J8P1: 2-benzyl-3-hydroxybutanedioate dehydrogenase (EC 1.1.1.85) from Nostoc punctiforme	37% id, 94% cov
Q4JB37: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Sulfolobus acidocaldarius	35% id, 96% cov
LEU3_SULTO / P50455: 3-isopropylmalate dehydrogenase; 3-IPM-DH; IMDH; Beta-IPM dehydrogenase; EC 1.1.1.85 from Sulfurisphaera tokodaii P50455: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Sulfurisphaera tokodaii	32% id, 97% cov
YeaU / b1800: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli dmlA / P76251: D-malate/3-isopropylmalate dehydrogenase (decarboxylating) (EC 1.1.1.83; EC 1.1.1.85; EC 1.1.1.93) from Escherichia coli	32% id, 98% cov
P96197: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Azotobacter vinelandii	44% id, 18% cov
More...

RRU_RS01875 Rru_A0356 WP_011388109.1: NADP-dependent isocitrate dehydrogenase is similar to:	PaperBLAST
D2YZL2: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) from Shewanella benthica	26% id, 37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory