Searching in Rhodospirillum rubrum ATCC 11170 (GCF_000013085.1)
Found 13 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Rhodospirillum rubrum ATCC 11170, or try another query
RRU_RS16840 Rru_A3263 WP_011391011.1: prephenate/arogenate dehydrogenase family protein is similar to: | PaperBLAST |
J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium | 55% id, 82% cov |
TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis | 44% id, 97% cov |
O67636: prephenate dehydrogenase (EC 1.3.1.12) from Aquifex aeolicus | 39% id, 88% cov |
RRU_RS05075 Rru_A0972 WP_011388727.1: prephenate dehydrogenase is similar to: | PaperBLAST |
TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis | 28% id, 89% cov |
TyrA / b2600: fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli | 34% id, 32% cov |
P43902: prephenate dehydrogenase (EC 1.3.1.12) from Haemophilus influenzae | 32% id, 33% cov |
odhB RRU_RS06350 Rru_A1214 WP_011388969.1: 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 35% id, 67% cov |
RRU_RS09745 Rru_A1879 WP_011389632.1: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 33% id, 67% cov |
RRU_RS16315 Rru_A3162 WP_011390910.1: prephenate dehydratase is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 31% id, 42% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
2176551-2178050 (frame -1) on NC_007643.1 Rhodospirillum rubrum ATCC 11170, complete sequence is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 32% id, 70% cov |
3653794-3654771 (frame -3) on NC_007643.1 Rhodospirillum rubrum ATCC 11170, complete sequence is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 30% id, 45% cov |
Lawrence Berkeley National Laboratory