Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodospirillum rubrum ATCC 11170 (GCF_000013085.1)

Found 8 curated entries in PaperBLAST's database that match '2.5.1.65' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Rhodospirillum rubrum ATCC 11170, or try another query

cysK RRU_RS19565 Rru_A3794 WP_014626663.1: cysteine synthase A
is similar to:
PaperBLAST

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

40% id,
99% cov

P9WP53: [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase (EC 2.5.1.113); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Mycobacterium tuberculosis

38% id,
94% cov

cysK / Q5JIZ7: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.65) from Thermococcus kodakarensis

33% id,
97% cov

More...

RRU_RS08380 Rru_A1616 WP_011389306.1: cysteine synthase A
is similar to:
PaperBLAST

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

37% id,
100% cov

P9WP53: [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase (EC 2.5.1.113); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Mycobacterium tuberculosis

32% id,
93% cov

cysK / Q5JIZ7: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.65) from Thermococcus kodakarensis

37% id,
23% cov

RRU_RS04125 Rru_A0787 WP_011388545.1: cystathionine beta-synthase
is similar to:
PaperBLAST

CS1 / A2EI82: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.47; EC 2.5.1.65) from Trichomonas vaginalis

37% id,
98% cov

P9WP53: [CysO sulfur-carrier protein]-thiocarboxylate-dependent cysteine synthase (EC 2.5.1.113); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Mycobacterium tuberculosis

35% id,
93% cov

cysK / Q5JIZ7: O-phosphoserine sulfhydrylase monomer (EC 2.5.1.65) from Thermococcus kodakarensis

29% id,
96% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3314673-3315974 (frame +3) on NC_007643.1 Rhodospirillum rubrum ATCC 11170, complete sequence
is similar to:
PaperBLAST

CYSK2_MYCTU / Q79FV4: S-sulfocysteine synthase; O-phospho-L-serine-dependent S-sulfocysteine synthase; OPS-dependent S-sulfocysteine synthase; O-phosphoserine sulfhydrylase; EC 2.8.5.1; EC 2.5.1.65 from Mycobacterium tuberculosis
Q79FV4: cysteine synthase (EC 2.5.1.47); O-phosphoserine sulfhydrylase (EC 2.5.1.65) from Mycobacterium tuberculosis

27% id,
58% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory