Curated BLAST
Searching in Rhodospirillum rubrum ATCC 11170 (GCF_000013085.1)
Found 17 curated entries in PaperBLAST's database that match '3.5.1.18' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Rhodospirillum rubrum ATCC 11170, or try another query
dapE RRU_RS17980 Rru_A3480 WP_011391227.1: succinyl-diaminopimelate desuccinylase is similar to: | PaperBLAST |
DAPE_VIBCH / Q9KQ52: Succinyl-diaminopimelate desuccinylase; SDAP desuccinylase; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; EC 3.5.1.18 from Vibrio cholerae Q9KQ52: succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) from Vibrio cholerae | 43% id, 97% cov |
DAPE_NEIMB / Q9JYL2: Succinyl-diaminopimelate desuccinylase; SDAP desuccinylase; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; EC 3.5.1.18 from Neisseria meningitidis Q9JYL2: succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) from Neisseria meningitidis | 43% id, 96% cov |
DAPE_ECOLI / P0AED7: Succinyl-diaminopimelate desuccinylase; SDAP desuccinylase; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; EC 3.5.1.18 from Escherichia coli MsgB / b2472: succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) from Escherichia coli dapE / RF|NP_416967: succinyl-diaminopimelate desuccinylase; EC 3.5.1.18 from Escherichia coli dapE / P0AED7: succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) from Escherichia coli | 42% id, 97% cov |
DAPE_SALTY / Q8ZN75: Succinyl-diaminopimelate desuccinylase; SDAP desuccinylase; Aspartyl peptidase; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; EC 3.5.1.18 from Salmonella typhimurium | 41% id, 97% cov |
DAPE_HAEIN / P44514: Succinyl-diaminopimelate desuccinylase; SDAP desuccinylase; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; EC 3.5.1.18 from Haemophilus influenzae dapE / P44514: N-succinyl-L,L-diaminopimelate desuccinylase subunit (EC 3.5.1.18) from Haemophilus influenzae P44514: succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) from Haemophilus influenzae | 40% id, 99% cov |
DAPE_HELPY / O25002: Succinyl-diaminopimelate desuccinylase; SDAP desuccinylase; N-succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; EC 3.5.1.18 from Helicobacter pylori O25002: succinyl-diaminopimelate desuccinylase (EC 3.5.1.18) from Helicobacter pylori | 34% id, 100% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 1 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory