Curated BLAST for Genomes

 

Curated BLAST

Searching in Rhodospirillum rubrum ATCC 11170 (GCF_000013085.1)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Rhodospirillum rubrum ATCC 11170, or try another query

RRU_RS04120 Rru_A0786 WP_011388544.1: PLP-dependent aspartate aminotransferase family protein
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 62% id,
99% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 60% id,
98% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 61% id,
95% cov

More...

cysK RRU_RS19565 Rru_A3794 WP_014626663.1: cysteine synthase A
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 51% id,
97% cov

RRU_RS00495 Rru_A0098 WP_011387859.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 41% id,
98% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 41% id,
99% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 42% id,
96% cov

More...

metZ RRU_RS16580 Rru_A3214 WP_011390962.1: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 42% id,
89% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 40% id,
93% cov

MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis

 37% id,
99% cov

More...

RRU_RS04125 Rru_A0787 WP_011388545.1: cystathionine beta-synthase
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 41% id,
92% cov

RRU_RS08380 Rru_A1616 WP_011389306.1: cysteine synthase A
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 36% id,
98% cov

RRU_RS09535 Rru_A1836 WP_011389589.1: PLP-dependent transferase
is similar to:		 PaperBLAST

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 37% id,
94% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 35% id,
98% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 34% id,
97% cov

More...

metC RRU_RS08365 Rru_A1613 WP_011389303.1: cystathionine beta-lyase
is similar to:		 PaperBLAST

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 35% id,
100% cov

7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579

 35% id,
100% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 36% id,
94% cov

More...

RRU_RS04060 Rru_A0774 WP_011388532.1: PLP-dependent transferase
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 35% id,
98% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 35% id,
96% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 35% id,
94% cov

More...

RRU_RS10755 Rru_A2075 WP_011389828.1: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:		 PaperBLAST

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 36% id,
97% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 35% id,
99% cov

Q96VU7: cystathionine gamma-lyase (EC 4.4.1.1) from Neurospora crassa

 30% id,
95% cov

More...

RRU_RS04110 Rru_A0784 WP_014626023.1: PLP-dependent transferase
is similar to:		 PaperBLAST

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 34% id,
97% cov

Q96VU7: cystathionine gamma-lyase (EC 4.4.1.1) from Neurospora crassa

 31% id,
96% cov

Q4WCI1: cystathionine gamma-lyase (EC 4.4.1.1) from Aspergillus fumigatus

 33% id,
70% cov

More...

RRU_RS04070 Rru_A0776 WP_011388534.1: aminotransferase
is similar to:		 PaperBLAST

6ldoA / F9UT53: Crystal structure of cystathionine gamma-lyase from lactobacillus plantarum complexed with l-serine

 31% id,
60% cov

B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

 28% id,
57% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 12 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory