Searching in Novosphingobium aromaticivorans DSM 12444 (GCF_000013325.1)
Found 4 curated entries in PaperBLAST's database that match '1.3.8.10' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 21 relevant proteins in Novosphingobium aromaticivorans DSM 12444, or try another query
| SARO_RS08250 Saro_1645 WP_011445295.1: isovaleryl-CoA dehydrogenase is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 39% id, 99% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 38% id, 91% cov |
| SARO_RS04295 Saro_0858 WP_011444517.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 38% id, 99% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 36% id, 91% cov |
| SARO_RS00655 Saro_0132 WP_011443795.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 35% id, 98% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 38% id, 90% cov |
| SARO_RS06120 Saro_1224 WP_011444883.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 32% id, 97% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 34% id, 89% cov |
| SARO_RS06105 Saro_1221 WP_011444880.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 32% id, 93% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 32% id, 91% cov |
| SARO_RS17970 Saro_3419 WP_011906666.1: acyl-CoA dehydrogenase is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 30% id, 98% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 29% id, 90% cov |
| SARO_RS12645 Saro_2511 WP_011446153.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 32% id, 91% cov |
| SARO_RS07855 Saro_1568 WP_011445218.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 31% id, 90% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 29% id, 81% cov |
| SARO_RS04975 Saro_0996 WP_011444655.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 28% id, 98% cov |
| SARO_RS10585 Saro_2105 WP_011445753.1: acyl-CoA dehydrogenase C-terminal domain-containing protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 31% id, 85% cov |
| SARO_RS04995 Saro_1000 WP_011444659.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 31% id, 84% cov |
| SARO_RS07860 Saro_1569 WP_011445219.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 27% id, 95% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 24% id, 87% cov |
| SARO_RS19680 Saro_3761 WP_011907002.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 26% id, 98% cov |
| SARO_RS19805 Saro_3786 WP_011907027.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 28% id, 88% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 27% id, 74% cov |
| SARO_RS00630 Saro_0127 WP_011443790.1: acyl-CoA dehydrogenase is similar to: | PaperBLAST |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 29% id, 82% cov |
| SARO_RS19655 Saro_3756 WP_011906997.1: acyl-CoA dehydrogenase is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 27% id, 85% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 27% id, 81% cov |
| SARO_RS19775 Saro_3780 WP_041551672.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 25% id, 87% cov |
| SARO_RS18995 Saro_3624 WP_011906870.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 29% id, 69% cov |
| SARO_RS04990 Saro_0999 WP_011444658.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 28% id, 67% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 30% id, 46% cov |
| SARO_RS19660 Saro_3757 WP_011906998.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 34% id, 34% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 33% id, 29% cov |
| SARO_RS19000 Saro_3625 WP_234007480.1: acyl-CoA dehydrogenase family protein is similar to: | PaperBLAST |
CH1CO_GEOMG / Q39QF5: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; CHeneCoA dehydrogenase; EC 1.3.8.10 from Geobacter metallireducens | 32% id, 36% cov |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 26% id, 35% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 20 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 394326-395636 (frame +3) on NC_009427.1 Novosphingobium aromaticivorans DSM 12444 plasmid pNL2, complete sequence is similar to: | PaperBLAST |
CH1CO_SYNAS / Q2LQN9: Cyclohex-1-ene-1-carbonyl-CoA dehydrogenase; Ch1CoA dehydrogenase; EC 1.3.8.10 from Syntrophus aciditrophicus | 25% id, 96% cov |
Lawrence Berkeley National Laboratory