Curated BLAST for Genomes

 

Curated BLAST

Searching in Novosphingobium aromaticivorans DSM 12444 (GCF_000013325.1)

Found 31 curated entries in PaperBLAST's database that match '2.6.1.52' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Novosphingobium aromaticivorans DSM 12444, or try another query

SARO_RS13600 Saro_2679 WP_011446321.1: phosphoserine transaminase
is similar to:
PaperBLAST

serC / Q8TNI1: phosphoserine aminotransferase monomer (EC 2.6.1.52; EC 2.6.1.1) from Methanosarcina acetivorans

58% id,
99% cov

SERC_METBF / P52878: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Methanosarcina barkeri
P52878: phosphoserine transaminase (EC 2.6.1.52) from Methanosarcina barkeri

57% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory