Curated BLAST for Genomes

 

Curated BLAST

Searching in Novosphingobium aromaticivorans DSM 12444 (GCF_000013325.1)

Found 19 curated entries in PaperBLAST's database that match '2.7.7.12' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Novosphingobium aromaticivorans DSM 12444, or try another query

SARO_RS02705 Saro_0543 WP_011444204.1: UDP-glucose--hexose-1-phosphate uridylyltransferase
is similar to:
PaperBLAST

GAL7_ECOLI / P09148: Galactose-1-phosphate uridylyltransferase; Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase; EC 2.7.7.12 from Escherichia coli
GalB / b0758: galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Escherichia coli
galT / P09148: galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Escherichia coli
P09148: UDP-glucose-hexose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Escherichia coli

58% id,
97% cov

A2AMS3: UDP-glucose-hexose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Mus musculus

54% id,
94% cov

GALT_HUMAN / P07902: Galactose-1-phosphate uridylyltransferase; Gal-1-P uridylyltransferase; UDP-glucose--hexose-1-phosphate uridylyltransferase; EC 2.7.7.12 from Homo sapiens
GALT / P07902: galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Homo sapiens
P07902: UDP-glucose-hexose-1-phosphate uridylyltransferase (EC 2.7.7.12) from Homo sapiens

54% id,
89% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory