Curated BLAST for Genomes

 

Curated BLAST

Searching in Stutzerimonas stutzeri A1501 (GCF_000013785.1)

Found 8 curated entries in PaperBLAST's database that match '1.3.8.6' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Stutzerimonas stutzeri A1501, or try another query

PST_RS02285 PST_0442 WP_011911678.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

93% id,
100% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

84% id,
99% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

83% id,
99% cov

More...

PST_RS16120 PST_3213 WP_011914286.1: isovaleryl-CoA dehydrogenase
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

35% id,
94% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

34% id,
94% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

33% id,
94% cov

More...

PST_RS09725 PST_1922 WP_011913066.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

34% id,
94% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

34% id,
94% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

32% id,
95% cov

More...

PST_RS09700 PST_1917 WP_011913061.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

34% id,
94% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

34% id,
94% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

33% id,
92% cov

More...

PST_RS00520 PST_0101 WP_011911350.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

29% id,
93% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

27% id,
93% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

27% id,
92% cov

More...

PST_RS03110 PST_0606 WP_011911838.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

28% id,
95% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

29% id,
91% cov

GCDH_PIG / P81140: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Sus scrofa

28% id,
93% cov

More...

PST_RS08310 PST_1640 WP_011912802.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

27% id,
96% cov

GCDH_PIG / P81140: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Sus scrofa

29% id,
87% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

30% id,
76% cov

More...

PST_RS08590 PST_1694 WP_011912851.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

28% id,
87% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

27% id,
86% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

28% id,
78% cov

More...

PST_RS00745 PST_0144 WP_041755198.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

24% id,
96% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

23% id,
96% cov

PST_RS01630 PST_0311 WP_011911549.1: acyl-CoA dehydrogenase C-terminal domain-containing protein
is similar to:
PaperBLAST

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

27% id,
84% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

29% id,
71% cov

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

27% id,
71% cov

More...

PST_RS19205 PST_3858 WP_011914866.1: acyl-CoA dehydrogenase C-terminal domain-containing protein
is similar to:
PaperBLAST

GCDH_HUMAN / Q92947: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Homo sapiens
Q92947: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Homo sapiens

28% id,
78% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

28% id,
74% cov

GCDH_MOUSE / Q60759: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Mus musculus
Q60759: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Mus musculus

30% id,
66% cov

PST_RS00515 PST_0100 WP_011911349.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

gcdH / Q88RH2: glutaryl-CoA dehydrogenase (EC 1.3.8.6) from Pseudomonas putida

25% id,
85% cov

B0EVL5: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Azoarcus sp.

24% id,
85% cov

Q3JP94: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Burkholderia pseudomallei

24% id,
84% cov

PST_RS17705 PST_3552 WP_011914575.1: acyl-CoA dehydrogenase family protein
is similar to:
PaperBLAST

GCDH_HUMAN / Q92947: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Homo sapiens
Q92947: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Homo sapiens

21% id,
85% cov

PST_RS19215 PST_3860 WP_041755957.1: phenylacyl-CoA dehydrogenase
is similar to:
PaperBLAST

GCDH_MOUSE / Q60759: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Mus musculus
Q60759: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Mus musculus

32% id,
40% cov

PST_RS19305 PST_3878 WP_011914886.1: acyl-CoA dehydrogenase
is similar to:
PaperBLAST

GCDH_MOUSE / Q60759: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Mus musculus
Q60759: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Mus musculus

26% id,
44% cov

GCDH_HUMAN / Q92947: Glutaryl-CoA dehydrogenase, mitochondrial; GCD; EC 1.3.8.6 from Homo sapiens
Q92947: glutaryl-CoA dehydrogenase (ETF) (EC 1.3.8.6) from Homo sapiens

32% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory