Curated BLAST for Genomes

 

Curated BLAST

Searching in Stutzerimonas stutzeri A1501 (GCF_000013785.1)

Found 42 curated entries in PaperBLAST's database that match '1.4.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Stutzerimonas stutzeri A1501, or try another query

PST_RS12035 PST_2393 WP_011913508.1: NAD-glutamate dehydrogenase
is similar to:
PaperBLAST

Psest_1944: NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form from Pseudomonas stutzeri

95% id,
100% cov

DHE2_PSEAE / Q9HZE0: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Pseudomonas aeruginosa

76% id,
100% cov

DHE2_HALED / E1V4J5: NAD-specific glutamate dehydrogenase; NAD-GDH; NAD(+)-dependent glutamate dehydrogenase; EC 1.4.1.2 from Halomonas elongata

53% id,
99% cov

More...

gdhA PST_RS04775 PST_0934 WP_041755384.1: NADP-specific glutamate dehydrogenase
is similar to:
PaperBLAST

Q9TVN3: glutamate dehydrogenase (EC 1.4.1.2) from Entodinium caudatum

56% id,
99% cov

DHE2_CLOSY / P24295: NAD-specific glutamate dehydrogenase; NAD-GDH; EC 1.4.1.2 from Clostridium symbiosum
P24295: glutamate dehydrogenase (EC 1.4.1.2) from [Clostridium] symbiosum

54% id,
100% cov

P96110: trimer complex (EC 1.4.1.2) from Thermotoga maritima

32% id,
99% cov

More...

PST_RS04435 PST_0867 WP_014595825.1: Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein
is similar to:
PaperBLAST

DHE2_PYRCJ / A3MUY9: NAD(+)-dependent glutamate dehydrogenase; NAD-GDH; NAD-specific glutamate dehydrogenase; EC 1.4.1.2 from Pyrobaculum calidifontis
A3MUY9: glutamate dehydrogenase (EC 1.4.1.2) from Pyrobaculum calidifontis

28% id,
70% cov

GDH2 / Q38946: glutamate dehydrogenase β subunit (EC 1.4.1.2) from Arabidopsis thaliana

27% id,
71% cov

Q43314: glutamate dehydrogenase (EC 1.4.1.2); glutamate dehydrogenase [NAD(P)+] (EC 1.4.1.3) from Arabidopsis thaliana

26% id,
71% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory