Curated BLAST for Genomes

 

Curated BLAST

Searching in Stutzerimonas stutzeri A1501 (GCF_000013785.1)

Found 60 curated entries in PaperBLAST's database that match '2.7.2.4' as complete word(s).

These curated entries have 37 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Stutzerimonas stutzeri A1501, or try another query

PST_RS06980 PST_1370 WP_011912547.1: aspartate kinase
is similar to:
PaperBLAST

AKLYS_STUS1 / A4VJB4: Aspartate kinase Ask_LysC; Aspartokinase; EC 2.7.2.4 from Stutzerimonas stutzeri

100% id,
100% cov

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

92% id,
99% cov

AK_PSEFS / C3JXY0: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas fluorescens

90% id,
99% cov

More...

PST_RS00920 PST_0177 WP_013981377.1: aspartate kinase
is similar to:
PaperBLAST

AKECT_STUS1 / A4VFY3: Aspartate kinase Ask_Ect; Aspartokinase; EC 2.7.2.4 from Stutzerimonas stutzeri

100% id,
100% cov

Q57991: aspartate kinase (EC 2.7.2.4) from Methanocaldococcus jannaschii

25% id,
100% cov

AK2_ARATH / O23653: Aspartokinase 2, chloroplastic; Aspartate kinase 2; EC 2.7.2.4 from Arabidopsis thaliana
O23653: aspartate kinase (EC 2.7.2.4) from Arabidopsis thaliana

27% id,
84% cov

More...

PST_RS06090 PST_1198 WP_020308877.1: homoserine dehydrogenase
is similar to:
PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima

43% id,
42% cov

CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp.

29% id,
30% cov

Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis

26% id,
32% cov

More...

lysA PST_RS02635 PST_0511 WP_011911744.1: diaminopimelate decarboxylase
is similar to:
PaperBLAST

N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica

36% id,
42% cov

pyrH PST_RS07800 PST_1539 WP_011912702.1: UMP kinase
is similar to:
PaperBLAST

AK_PSEFS / C3JXY0: Aspartate kinase; Aspartokinase; EC 2.7.2.4 from Pseudomonas fluorescens

30% id,
39% cov

O69077: aspartate kinase (EC 2.7.2.4) from Pseudomonas aeruginosa

30% id,
39% cov

AKLYS_STUS1 / A4VJB4: Aspartate kinase Ask_LysC; Aspartokinase; EC 2.7.2.4 from Stutzerimonas stutzeri

29% id,
39% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1306242-1307603 (frame +3) on NC_009434.1 Stutzerimonas stutzeri A1501, complete sequence
is similar to:
PaperBLAST

Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima
Also see hits to annotated proteins above

42% id,
44% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory