Curated BLAST for Genomes

 

Curated BLAST

Searching in Stutzerimonas stutzeri A1501 (GCF_000013785.1)

Found 6 curated entries in PaperBLAST's database that match 'D-alanine%dehydrogenase' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Stutzerimonas stutzeri A1501, or try another query

dadA PST_RS02490 PST_0483 WP_011911717.1: D-amino acid dehydrogenase
is similar to:
PaperBLAST

Psest_3793: D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri

96% id,
100% cov

DADA1_PSEAE / Q9HTQ0: D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa

85% id,
100% cov

DADA_KLEAE / O30745: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Klebsiella aerogenes

64% id,
100% cov

More...

PST_RS11125 PST_2205 WP_011913335.1: D-amino acid dehydrogenase
is similar to:
PaperBLAST

Psest_3793: D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri

40% id,
96% cov

DADA1_PSEAE / Q9HTQ0: D-amino acid dehydrogenase 1; D-alanine dehydrogenase 1; EC 1.4.99.- from Pseudomonas aeruginosa

39% id,
96% cov

AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense

38% id,
95% cov

More...

PST_RS20465 PST_4110 WP_011915112.1: D-amino acid dehydrogenase
is similar to:
PaperBLAST

Ac3H11_4848: D-alanine dehydrogenase (EC 1.4.99.-) from Acidovorax sp.

35% id,
96% cov

AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense

35% id,
94% cov

Psest_3793: D-alanine dehydrogenase (EC 1.4.99.-) from Pseudomonas stutzeri

32% id,
94% cov

More...

thiO PST_RS04985 PST_0976 WP_085988597.1: glycine oxidase ThiO
is similar to:
PaperBLAST

DADA_KLEAE / O30745: D-amino acid dehydrogenase; D-alanine dehydrogenase; EC 1.4.99.- from Klebsiella aerogenes

30% id,
69% cov

AZOBR_RS08020: D-alanine dehydrogenase (EC 1.4.99.-) from Azospirillum brasilense

28% id,
69% cov

Ac3H11_4848: D-alanine dehydrogenase (EC 1.4.99.-) from Acidovorax sp.

31% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory