Curated BLAST for Genomes

 

Curated BLAST

Searching in Stutzerimonas stutzeri A1501 (GCF_000013785.1)

Found 1 curated entries in PaperBLAST's database that match 'cystathionine-gamma-lyase' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Stutzerimonas stutzeri A1501, or try another query

PST_RS09045 PST_1785 WP_011912938.1: O-succinylhomoserine sulfhydrylase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

38% id,
89% cov

PST_RS02925 PST_0568 WP_011911801.1: bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea

38% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

636247-637587 (frame -3) on NC_009434.1 Stutzerimonas stutzeri A1501, complete sequence
is similar to:
PaperBLAST

CH_124009: cystathionine-gamma-lyase [Acremonium chrysogenum] from Magnaporthe grisea
Also see hits to annotated proteins above

36% id,
52% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory