Curated BLAST for Genomes

 

Curated BLAST

Searching in Trichodesmium erythraeum IMS101 (GCF_000014265.1)

Found 1 curated entries in PaperBLAST's database that match '1.1.1.377' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Trichodesmium erythraeum IMS101, or try another query

fabG TERY_RS16490 Tery_3438 WP_011612874.1: 3-oxoacyl-[acyl-carrier-protein] reductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

34% id,
97% cov

TERY_RS14005 Tery_2914 WP_011612441.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

28% id,
98% cov

tmpR TERY_RS03305 Tery_0696 WP_011610524.1: bifunctional dihydropteridine reductase/dihydrofolate reductase TmpR
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

28% id,
95% cov

tmpR TERY_RS03315 Tery_0698 WP_011610526.1: bifunctional dihydropteridine reductase/dihydrofolate reductase TmpR
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

27% id,
95% cov

TERY_RS16560 Tery_3453 WP_011612888.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

26% id,
94% cov

TERY_RS12585 Tery_2630 WP_011612187.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

30% id,
79% cov

TERY_RS15855 Tery_3313 WP_011612762.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

27% id,
84% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory