Searching in Trichodesmium erythraeum IMS101 (GCF_000014265.1)
Found 13 curated entries in PaperBLAST's database that match '4.1.2.19' as complete word(s).
These curated entries have 10 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Trichodesmium erythraeum IMS101, or try another query
| fabG TERY_RS16490 Tery_3438 WP_011612874.1: 3-oxoacyl-[acyl-carrier-protein] reductase is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 33% id, 38% cov |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 31% id, 38% cov |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 29% id, 37% cov |
| tmpR TERY_RS03315 Tery_0698 WP_011610526.1: bifunctional dihydropteridine reductase/dihydrofolate reductase TmpR is similar to: | PaperBLAST |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 33% id, 36% cov |
HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae | 29% id, 37% cov |
| TERY_RS14005 Tery_2914 WP_011612441.1: SDR family oxidoreductase is similar to: | PaperBLAST |
Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae | 32% id, 37% cov |
HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae | 32% id, 38% cov |
SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti | 32% id, 37% cov |
| tmpR TERY_RS03305 Tery_0696 WP_011610524.1: bifunctional dihydropteridine reductase/dihydrofolate reductase TmpR is similar to: | PaperBLAST |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 33% id, 36% cov |
HSERO_RS22235: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Herbaspirillum seropedicae | 26% id, 37% cov |
| TERY_RS16560 Tery_3453 WP_011612888.1: SDR family oxidoreductase is similar to: | PaperBLAST |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 26% id, 36% cov |
| TERY_RS18895 Tery_3927 WP_011613288.1: SDR family oxidoreductase is similar to: | PaperBLAST |
Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis | 28% id, 25% cov |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 27% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 5278537-5279427 (frame -2) on NC_008312.1 Trichodesmium erythraeum IMS101, complete sequence is similar to: | PaperBLAST |
rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis | 26% id, 39% cov |
Lawrence Berkeley National Laboratory