Searching in Pelobacter propionicus DSM 2379 (GCF_000015045.1)
Found 8 curated entries in PaperBLAST's database that match '6.3.1.1' as complete word(s).
These curated entries have 5 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Pelobacter propionicus DSM 2379, or try another query
| asnS PPRO_RS08510 Ppro_1706 WP_011735595.1: asparagine--tRNA ligase is similar to: | PaperBLAST |
Q9V228: asparagine-tRNA ligase (EC 6.1.1.22); aspartate-ammonia ligase (EC 6.3.1.1) from Pyrococcus abyssi | 37% id, 36% cov |
| asnB PPRO_RS12195 Ppro_2466 WP_011736327.1: asparagine synthase (glutamine-hydrolyzing) is similar to: | PaperBLAST |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 43% id, 30% cov |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 28% id, 38% cov |
| asnB PPRO_RS14235 Ppro_2871 WP_011736704.1: asparagine synthase (glutamine-hydrolyzing) is similar to: | PaperBLAST |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 29% id, 41% cov |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 37% id, 30% cov |
| PPRO_RS00245 Ppro_0050 WP_198138306.1: asparagine synthase-related protein is similar to: | PaperBLAST |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 28% id, 35% cov |
AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli | 28% id, 22% cov |
| PPRO_RS16320 Ppro_3277 WP_011737087.1: ankyrin repeat domain-containing protein is similar to: | PaperBLAST |
TC 1.A.4.6.1 / Q8BLA8: Cold-activated cation channel in nociceptive sensory neurons, ANKTM1, with lower activation temperature (in the noxious cold range) than TRPM8 (TC #1.A.4.5.7) (Story et al., 2003). Also called TRPA1 (Acc #AAS78661) which translates sound into electric signals in the ear. It sits at the tips of cilia in the inner ear and allows passage of K+ and Ca2+ into the cell. Vibrations in the hair cause the channel to open and close. The frequency of the sound waves generate an electrical signal of the same frequency (Jordt et al., 2004). (Shows 25% identity with α-latrotoxin precursor (TC #1.C.6.3.1.1) in its N-terminal half.) TRPA1 is a polyunsaturated fatty acid sensor in mammals, but not in flies and fish (Motter and Ahern, 2012). TRPA1 is regulated by its N-terminal ankyrin repeat domain from Mus musculus | 26% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3610381-3611142 (frame +1) on NC_008609.1 Pelobacter propionicus DSM 2379, complete sequence is similar to: | PaperBLAST |
TC 1.A.4.6.1 / Q8BLA8: Cold-activated cation channel in nociceptive sensory neurons, ANKTM1, with lower activation temperature (in the noxious cold range) than TRPM8 (TC #1.A.4.5.7) (Story et al., 2003). Also called TRPA1 (Acc #AAS78661) which translates sound into electric signals in the ear. It sits at the tips of cilia in the inner ear and allows passage of K+ and Ca2+ into the cell. Vibrations in the hair cause the channel to open and close. The frequency of the sound waves generate an electrical signal of the same frequency (Jordt et al., 2004). (Shows 25% identity with α-latrotoxin precursor (TC #1.C.6.3.1.1) in its N-terminal half.) TRPA1 is a polyunsaturated fatty acid sensor in mammals, but not in flies and fish (Motter and Ahern, 2012). TRPA1 is regulated by its N-terminal ankyrin repeat domain from Mus musculus | 26% id, 12% cov |
Lawrence Berkeley National Laboratory