Curated BLAST for Genomes

 

Curated BLAST

Searching in Pelobacter propionicus DSM 2379 (GCF_000015045.1)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pelobacter propionicus DSM 2379, or try another query

PPRO_RS09120 Ppro_1831 WP_011735720.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579

 52% id,
99% cov

MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis

 51% id,
100% cov

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 52% id,
96% cov

More...

PPRO_RS09115 Ppro_1830 WP_011735719.1: PLP-dependent aspartate aminotransferase family protein
is similar to:		 PaperBLAST

7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579

 53% id,
96% cov

MCCB_BACSU / O05394: Cystathionine gamma-lyase; Gamma-cystathionase; Homocysteine gamma-lyase; EC 4.4.1.1; EC 4.4.1.2 from Bacillus subtilis

 50% id,
100% cov

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 49% id,
99% cov

More...

cysK PPRO_RS09125 Ppro_1832 WP_011735721.1: cysteine synthase A
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 50% id,
95% cov

PPRO_RS16725 Ppro_3359 WP_011737168.1: cysteine synthase family protein
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 41% id,
93% cov

PPRO_RS08900 Ppro_1787 WP_011735676.1: homocysteine synthase
is similar to:		 PaperBLAST

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 36% id,
98% cov

CGL_DICDI / Q55DV9: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Dictyostelium discoideum

 35% id,
98% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 35% id,
95% cov

More...

PPRO_RS10870 Ppro_2189 WP_011736058.1: pyridoxal phosphate-dependent aminotransferase
is similar to:		 PaperBLAST

7nl1D / A0A125YN40: Crystal structure of cystathionine gamma-lyase from toxoplasma gondii

 24% id,
38% cov

B6K8Y1: cystathionine gamma-lyase (EC 4.4.1.1) from Toxoplasma gondii

 24% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory