Curated BLAST for Genomes

 

Curated BLAST

Searching in Bradyrhizobium sp. BTAi1 (GCF_000015165.1)

Found 19 curated entries in PaperBLAST's database that match '2.5.1.48' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Bradyrhizobium sp. BTAi1, or try another query

BBTA_RS03595 BBta_0768 WP_012041083.1: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa

 46% id,
95% cov

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

 36% id,
98% cov

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

 34% id,
100% cov

More...

BBTA_RS14845 BBta_3176 WP_012043307.1: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:		 PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

 39% id,
100% cov

metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa

 38% id,
96% cov

Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.

 36% id,
100% cov

More...

metC BBTA_RS18345 BBta_3922 WP_012043996.1: cystathionine beta-lyase
is similar to:		 PaperBLAST

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

 36% id,
100% cov

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

 32% id,
100% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 33% id,
96% cov

More...

BBTA_RS21505 BBta_4596 WP_012044616.1: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:		 PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

 35% id,
99% cov

Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.

 33% id,
99% cov

METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli

 32% id,
98% cov

More...

BBTA_RS18510 BBta_3953 WP_012044027.1: aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
is similar to:		 PaperBLAST

METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori

 33% id,
100% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 34% id,
95% cov

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

 32% id,
95% cov

More...

BBTA_RS11700 BBta_2509 WP_012042697.1: PLP-dependent transferase
is similar to:		 PaperBLAST

HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae

 33% id,
99% cov

Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp.

 32% id,
99% cov

METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli

 30% id,
100% cov

More...

BBTA_RS37085 BBta_p0051 WP_011930928.1: PLP-dependent transferase
is similar to:		 PaperBLAST

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 33% id,
92% cov

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

 33% id,
86% cov

metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa

 29% id,
95% cov

More...

BBTA_RS16155 BBta_3457 WP_012043561.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

 27% id,
45% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 27% id,
45% cov

hemA BBTA_RS18840 BBta_4023 WP_041751516.1: 5-aminolevulinate synthase
is similar to:		 PaperBLAST

METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli

 26% id,
38% cov

hisC BBTA_RS05595 BBta_1183 WP_012041476.1: histidinol-phosphate transaminase
is similar to:		 PaperBLAST

A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans

 29% id,
19% cov

METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis

 29% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory