Curated BLAST for Genomes

 

Curated BLAST

Searching in Bradyrhizobium sp. BTAi1 (GCF_000015165.1)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Bradyrhizobium sp. BTAi1, or try another query

asnB BBTA_RS26290 BBta_5624 WP_012045542.1: asparagine synthase (glutamine-hydrolyzing)
is similar to:
PaperBLAST

ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis

35% id,
97% cov

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

35% id,
64% cov

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

33% id,
63% cov

More...

BBTA_RS33775 BBta_7206 WP_041751063.1: N-acetylglutaminylglutamine amidotransferase
is similar to:
PaperBLAST

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

30% id,
98% cov

ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe
asn1 / RF|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe

27% id,
100% cov

ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis

34% id,
70% cov

More...

asnB BBTA_RS17340 BBta_3705 WP_012043792.1: asparagine synthase (glutamine-hydrolyzing)
is similar to:
PaperBLAST

ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis

38% id,
61% cov

Q14SM9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Glycine max

33% id,
64% cov

B3KYI2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris

32% id,
64% cov

More...

purF BBTA_RS17745 BBta_3787 WP_012043871.1: amidophosphoribosyltransferase
is similar to:
PaperBLAST

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

26% id,
27% cov

glmS BBTA_RS19515 BBta_4166 WP_012044228.1: glutamine--fructose-6-phosphate transaminase (isomerizing)
is similar to:
PaperBLAST

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

31% id,
17% cov

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

26% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory