Curated BLAST for Genomes

 

Curated BLAST

Searching in Polaromonas naphthalenivorans CJ2 (GCF_000015505.1)

Found 22 curated entries in PaperBLAST's database that match '1.14.16.1' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Polaromonas naphthalenivorans CJ2, or try another query

phhA PNAP_RS05595 Pnap_1117 WP_011800527.1: phenylalanine 4-monooxygenase
is similar to:		 PaperBLAST

phhA / P30967: phenylalanine hydroxylase (EC 1.14.16.1) from Chromobacterium violaceum
P30967: phenylalanine 4-monooxygenase (EC 1.14.16.1) from Chromobacterium violaceum

 59% id,
88% cov

Ac3H11_1847: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Acidovorax sp.

 47% id,
95% cov

AO356_03975: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

 47% id,
89% cov

More...

pheA PNAP_RS13950 Pnap_2793 WP_011802172.1: prephenate dehydratase
is similar to:		 PaperBLAST

PH4H_DICDI / Q54XS1: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; Tryptophan 5-hydroxylase; TRH; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Dictyostelium discoideum

 30% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory