Curated BLAST
Searching in Polaromonas naphthalenivorans CJ2 (GCF_000015505.1)
Found 18 curated entries in PaperBLAST's database that match '2.1.1.13' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Polaromonas naphthalenivorans CJ2, or try another query
metH PNAP_RS00580 Pnap_0117 WP_011799552.1: methionine synthase is similar to: | PaperBLAST |
METH_ECOLI / P13009: Methionine synthase; 5-methyltetrahydrofolate--homocysteine methyltransferase; Methionine synthase, vitamin-B12-dependent; MS; EC 2.1.1.13 from Escherichia coli MetH / b4019: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli metH: methionine synthase; EC 2.1.1.13 from Escherichia coli metH / P13009: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli | 61% id, 72% cov |
METH_RAT / Q9Z2Q4: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Rattus norvegicus Q9Z2Q4: methionine synthase (EC 2.1.1.13) from Rattus norvegicus | 53% id, 59% cov |
METH_HUMAN / Q99707: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Homo sapiens MTR / Q99707: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Homo sapiens Q99707: methionine synthase (EC 2.1.1.13) from Homo sapiens | 52% id, 59% cov |
PGA1_c13350: Methionine synthase component, B12 binding and B12-binding cap domains (EC:2.1.1.13) from Phaeobacter inhibens | 30% id, 85% cov |
metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum | 31% id, 71% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 30% id, 61% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 30% id, 27% cov |
DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris | 32% id, 25% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 27% id, 29% cov |
METH_RAT / Q9Z2Q4: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Rattus norvegicus Q9Z2Q4: methionine synthase (EC 2.1.1.13) from Rattus norvegicus | 52% id, 13% cov |
METH_HUMAN / Q99707: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Homo sapiens MTR / Q99707: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Homo sapiens Q99707: methionine synthase (EC 2.1.1.13) from Homo sapiens | 52% id, 13% cov |
More... |
PNAP_RS00570 Pnap_0115 WP_041376875.1: homocysteine S-methyltransferase family protein is similar to: | PaperBLAST |
PGA1_c13370: Methionine synthase component, methyltransferase domain (EC:2.1.1.13) from Phaeobacter inhibens | 30% id, 83% cov |
METH_ECOLI / P13009: Methionine synthase; 5-methyltetrahydrofolate--homocysteine methyltransferase; Methionine synthase, vitamin-B12-dependent; MS; EC 2.1.1.13 from Escherichia coli MetH / b4019: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli metH: methionine synthase; EC 2.1.1.13 from Escherichia coli metH / P13009: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Escherichia coli | 56% id, 27% cov |
METH_HUMAN / Q99707: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Homo sapiens MTR / Q99707: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Homo sapiens Q99707: methionine synthase (EC 2.1.1.13) from Homo sapiens | 55% id, 25% cov |
METH_RAT / Q9Z2Q4: Methionine synthase; MS; 5-methyltetrahydrofolate--homocysteine methyltransferase; Cobalamin-dependent methionine synthase; Vitamin-B12 dependent methionine synthase; EC 2.1.1.13 from Rattus norvegicus Q9Z2Q4: methionine synthase (EC 2.1.1.13) from Rattus norvegicus | 54% id, 26% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 36% id, 35% cov |
DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris | 35% id, 35% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 31% id, 38% cov |
metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum | 39% id, 25% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory