Curated BLAST for Genomes

 

Curated BLAST

Searching in Polaromonas naphthalenivorans CJ2 (GCF_000015505.1)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 23 relevant proteins in Polaromonas naphthalenivorans CJ2, or try another query

PNAP_RS02270 Pnap_0458 WP_011799880.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

Ac3H11_2994: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Acidovorax sp.

79% id,
99% cov

Mpe_A3367 / A2SL81: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methylibium petroleiphilum

67% id,
99% cov

PfGW456L13_2982: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Pseudomonas fluorescens

65% id,
99% cov

More...

bktB PNAP_RS05805 Pnap_1159 WP_011800568.1: beta-ketothiolase BktB
is similar to:
PaperBLAST

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator
Q0KBP1: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Cupriavidus necator

78% id,
100% cov

thlA1 / A5N3I5: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Clostridium kluyveri

52% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

51% id,
100% cov

More...

bktB PNAP_RS00315 Pnap_0060 WP_011799496.1: beta-ketothiolase BktB
is similar to:
PaperBLAST

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator
Q0KBP1: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Cupriavidus necator

77% id,
100% cov

thlA1 / A5N3I5: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Clostridium kluyveri

52% id,
100% cov

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

52% id,
100% cov

More...

PNAP_RS14005 Pnap_2804 WP_011802183.1: acetyl-CoA C-acetyltransferase
is similar to:
PaperBLAST

phbA / P14611: acetyl-CoA acetyltransferase subunit (EC 2.3.1.16) from Cupriavidus necator

76% id,
100% cov

PS417_10515 / A0A1N7U0F8: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Pseudomonas simiae

67% id,
100% cov

phaA / Q3IZW1: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Cereibacter sphaeroides

65% id,
100% cov

More...

pcaF PNAP_RS10715 Pnap_2136 WP_041376658.1: 3-oxoadipyl-CoA thiolase
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

66% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

47% id,
100% cov

Shewana3_0023: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella sp.

46% id,
100% cov

More...

pcaF PNAP_RS04310 Pnap_0867 WP_011800279.1: 3-oxoadipyl-CoA thiolase
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

66% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
atoB / P76461: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Escherichia coli

47% id,
98% cov

Shewana3_0023: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella sp.

46% id,
100% cov

More...

PNAP_RS17350 Pnap_3474 WP_011802842.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

FADA_BACSU / O32177: 3-ketoacyl-CoA thiolase; Acetyl-CoA acyltransferase; Beta-ketothiolase; EC 2.3.1.16 from Bacillus subtilis

50% id,
99% cov

Sama_0031: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella amazonensis

45% id,
100% cov

Shewana3_0023: Acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Shewanella sp.

45% id,
100% cov

More...

PNAP_RS09225 Pnap_1843 WP_011801234.1: acetyl-CoA C-acyltransferase
is similar to:
PaperBLAST

FADA_BACSU / O32177: 3-ketoacyl-CoA thiolase; Acetyl-CoA acyltransferase; Beta-ketothiolase; EC 2.3.1.16 from Bacillus subtilis

50% id,
100% cov

phaA / Q3IZW1: acetyl-CoA acetyltransferase (EC 2.3.1.16) from Cereibacter sphaeroides

42% id,
99% cov

PGA1_c03400: acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) from Phaeobacter inhibens

42% id,
99% cov

More...

PNAP_RS03960 Pnap_0797 WP_011800211.1: thiolase family protein
is similar to:
PaperBLAST

Q8BWT1: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Mus musculus

41% id,
98% cov

THIM_RAT / P13437: 3-ketoacyl-CoA thiolase, mitochondrial; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; Acyl-CoA hydrolase, mitochondrial; Beta-ketothiolase; Mitochondrial 3-oxoacyl-CoA thiolase; EC 2.3.1.16; EC 2.3.1.9; EC 3.1.2.-; EC 3.1.2.1; EC 3.1.2.2 from Rattus norvegicus

40% id,
98% cov

THIM_HUMAN / P42765: 3-ketoacyl-CoA thiolase, mitochondrial; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; Acyl-CoA hydrolase, mitochondrial; Beta-ketothiolase; Mitochondrial 3-oxoacyl-CoA thiolase; T1; EC 2.3.1.16; EC 2.3.1.9; EC 3.1.2.-; EC 3.1.2.1; EC 3.1.2.2 from Homo sapiens
ACAA2 / P42765: 3-ketoacyl-CoA thiolase, mitochondrial (EC 2.3.1.16) from Homo sapiens
P42765: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Homo sapiens

40% id,
98% cov

More...

PNAP_RS09220 Pnap_1842 WP_011801233.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

33% id,
91% cov

PNAP_RS10710 Pnap_2135 WP_041377179.1: 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

32% id,
92% cov

PNAP_RS09600 Pnap_1915 WP_041376645.1: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

31% id,
37% cov

PNAP_RS14675 Pnap_2940 WP_011802313.1: 3-hydroxyacyl-CoA dehydrogenase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

31% id,
37% cov

PNAP_RS03000 Pnap_0605 WP_011800024.1: crotonase/enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

30% id,
34% cov

PNAP_RS10675 Pnap_2128 WP_011801515.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

35% id,
28% cov

boxC PNAP_RS14695 Pnap_2944 WP_011802317.1: 2,3-epoxybenzoyl-CoA dihydrolase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

25% id,
39% cov

PNAP_RS16825 Pnap_3369 WP_011802737.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

39% id,
23% cov

PNAP_RS14680 Pnap_2941 WP_011802314.1: enoyl-CoA hydratase-related protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

27% id,
31% cov

PNAP_RS18065 Pnap_3619 WP_011802985.1: enoyl-CoA hydratase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

28% id,
26% cov

PNAP_RS09595 Pnap_1914 WP_011801305.1: enoyl-CoA hydratase
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

28% id,
23% cov

fabF PNAP_RS15355 Pnap_3070 WP_011802441.1: beta-ketoacyl-ACP synthase II
is similar to:
PaperBLAST

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator
Q0KBP1: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Cupriavidus necator

33% id,
18% cov

ECHB_HUMAN / P55084: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Homo sapiens
HADHB / P55084: mitochondrial trifunctional enzyme β subunit (EC 2.3.1.16) from Homo sapiens

26% id,
21% cov

ECHB_MOUSE / Q99JY0: Trifunctional enzyme subunit beta, mitochondrial; TP-beta; EC 2.3.1.155; EC 2.3.1.16 from Mus musculus

25% id,
21% cov

More...

PNAP_RS14335 Pnap_2871 WP_011802246.1: enoyl-CoA hydratase/isomerase family protein
is similar to:
PaperBLAST

Q64428: long-chain-3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.211); acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Rattus norvegicus

24% id,
24% cov

PNAP_RS13345 Pnap_2672 WP_011802051.1: beta-ketoacyl-[acyl-carrier-protein] synthase family protein
is similar to:
PaperBLAST

pcaF / Q51956: subunit of β-ketoadipyl CoA thiolase (EC 2.3.1.174; EC 2.3.1.16) from Pseudomonas putida

34% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 20 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory