Curated BLAST for Genomes

 

Curated BLAST

Searching in Polaromonas naphthalenivorans CJ2 (GCF_000015505.1)

Found 39 curated entries in PaperBLAST's database that match '2.4.2.17' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Polaromonas naphthalenivorans CJ2, or try another query

hisG PNAP_RS03440 Pnap_0695 WP_011800109.1: ATP phosphoribosyltransferase
is similar to:
PaperBLAST

HSERO_RS20350: ATP phosphoribosyltransferase (EC 2.4.2.17) from Herbaspirillum seropedicae

71% id,
97% cov

BPHYT_RS17715: ATP phosphoribosyltransferase (EC 2.4.2.17) from Burkholderia phytofirmans

71% id,
92% cov

PP_0965: ATP phosphoribosyltransferase (EC 2.4.2.17) from Pseudomonas putida

57% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory