Curated BLAST for Genomes

 

Curated BLAST

Searching in Halorhodospira halophila SL1 (GCF_000015585.1)

Found 10 curated entries in PaperBLAST's database that match '1.1.1.23' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Halorhodospira halophila SL1, or try another query

hisD HHAL_RS10670 Hhal_2112 WP_011814898.1: histidinol dehydrogenase
is similar to:
PaperBLAST

Q8G2R2: histidinol dehydrogenase (EC 1.1.1.23) from Brucella suis

49% id,
99% cov

HISX_SALTY / P10370: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Salmonella typhimurium

42% id,
91% cov

HISX_ECOLI / P06988: Histidinol dehydrogenase; HDH; EC 1.1.1.23 from Escherichia coli
hisD / P06988: histidinal/histidinol dehydrogenase (EC 1.1.1.23) from Escherichia coli

41% id,
91% cov

More...

hisI HHAL_RS08695 Hhal_1726 WP_011814512.1: phosphoribosyl-AMP cyclohydrolase
is similar to:
PaperBLAST

A1BPP9: histidinol dehydrogenase (EC 1.1.1.23) from Geotrichum candidum

41% id,
11% cov

HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae

36% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory