Curated BLAST for Genomes

 

Curated BLAST

Searching in Halorhodospira halophila SL1 (GCF_000015585.1)

Found 80 curated entries in PaperBLAST's database that match '2.5.1.47' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Halorhodospira halophila SL1, or try another query

cysK HHAL_RS02830 Hhal_0556 WP_041595022.1: cysteine synthase A
is similar to:
PaperBLAST

Q2PZM5: cysteine synthase (EC 2.5.1.47) from Azospirillum brasilense

61% id,
98% cov

CYSK_MYCTU / P9WP55: O-acetylserine sulfhydrylase; OAS sulfhydrylase; OASS; Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine-specific cysteine synthase; Sulfide-dependent cysteine synthase; EC 2.5.1.47 from Mycobacterium tuberculosis
P9WP55: cysteine synthase (EC 2.5.1.47) from Mycobacterium tuberculosis

59% id,
99% cov

C4ITG6: cysteine synthase (EC 2.5.1.47) from Brucella abortus

61% id,
95% cov

More...

HHAL_RS08530 Hhal_1694 WP_011814480.1: cysteine synthase A
is similar to:
PaperBLAST

CYSK_SCHPO / O59701: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Schizosaccharomyces pombe

59% id,
93% cov

A0A0F6AQU1: cysteine synthase (EC 2.5.1.47) from Brucella abortus

58% id,
94% cov

CYSK_NEUCR / Q7RYW6: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Neurospora crassa

62% id,
88% cov

More...

HHAL_RS10880 Hhal_2153 WP_011814939.1: bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

49% id,
98% cov

trpB HHAL_RS09100 Hhal_1804 WP_011814590.1: tryptophan synthase subunit beta
is similar to:
PaperBLAST

Q84IF9: cysteine synthase (EC 2.5.1.47); L-3-cyanoalanine synthase (EC 4.4.1.9) from Geobacillus stearothermophilus

24% id,
99% cov

ilvA HHAL_RS05990 Hhal_1177 WP_011813975.1: threonine ammonia-lyase, biosynthetic
is similar to:
PaperBLAST

Q84IF9: cysteine synthase (EC 2.5.1.47); L-3-cyanoalanine synthase (EC 4.4.1.9) from Geobacillus stearothermophilus

27% id,
88% cov

CYSK_BACSU / P37887: Cysteine synthase; CSase; O-acetylserine (thiol)-lyase; OAS-TL; Superoxide-inducible protein 11; SOI11; EC 2.5.1.47 from Bacillus subtilis
P37887: cysteine synthase (EC 2.5.1.47) from Bacillus subtilis

27% id,
87% cov

W5S3I4: cysteine synthase (EC 2.5.1.47) from Leucaena leucocephala

24% id,
90% cov

More...

HHAL_RS09065 Hhal_1797 WP_011814583.1: O-succinylhomoserine sulfhydrylase
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

35% id,
50% cov

thrC HHAL_RS00655 Hhal_0124 WP_011812941.1: threonine synthase
is similar to:
PaperBLAST

A8YBP8: cysteine synthase (EC 2.5.1.47) from Microcystis aeruginosa

31% id,
56% cov

A8YBS4: cysteine synthase (EC 2.5.1.47) from Microcystis aeruginosa

31% id,
55% cov

A2GMG5: cysteine synthase (EC 2.5.1.47) from Trichomonas vaginalis

29% id,
58% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1850266-1851342 (frame -2) on NC_008789.1 Halorhodospira halophila SL1, complete sequence
is similar to:
PaperBLAST

CYSK_SCHPO / O59701: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Schizosaccharomyces pombe
Also see hits to annotated proteins above

58% id,
95% cov

CYSK_NEUCR / Q7RYW6: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Neurospora crassa
Also see hits to annotated proteins above

60% id,
90% cov

CYSK_EMENI / P50867: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Emericella nidulans
cysB / GB|AAC06128.1: cysteine synthase; EC 2.5.1.47 from Emericella nidulans
Also see hits to annotated proteins above

58% id,
93% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory