Curated BLAST for Genomes

 

Curated BLAST

Searching in Halorhodospira halophila SL1 (GCF_000015585.1)

Found 30 curated entries in PaperBLAST's database that match '3.1.3.15' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Halorhodospira halophila SL1, or try another query

HHAL_RS04535 Hhal_0886 WP_011813685.1: HAD family phosphatase
is similar to:
PaperBLAST

HIS9_PSEAE / Q9I6F6: Histidinol-phosphatase; Hol-Pase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Pseudomonas aeruginosa

55% id,
100% cov

HP15_461: Histidinol-phosphatase (EC:3.1.3.15) from Marinobacter adhaerens

54% id,
100% cov

Psest_3864: Histidinol-phosphatase (EC:3.1.3.15) from Pseudomonas stutzeri

54% id,
100% cov

More...

cysQ HHAL_RS10395 Hhal_2058 WP_011814844.1: 3'(2'),5'-bisphosphate nucleotidase CysQ
is similar to:
PaperBLAST

Ga0059261_2035: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Sphingomonas koreensis

33% id,
90% cov

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

32% id,
90% cov

HISN_CORGL / Q8NS80: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Corynebacterium glutamicum
hisN / Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum
Q8NS80: histidinol-phosphatase (EC 3.1.3.15) from Corynebacterium glutamicum

30% id,
86% cov

More...

HHAL_RS09060 Hhal_1796 WP_011814582.1: inositol monophosphatase family protein
is similar to:
PaperBLAST

AZOBR_RS03845: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Azospirillum brasilense

30% id,
97% cov

PGA1_c21860: Histidinol-phosphatase [alternative form] (EC 3.1.3.15) from Phaeobacter inhibens

32% id,
89% cov

HISN_MYCTU / P95189: Histidinol-phosphatase; HolPase; Histidinol-phosphate phosphatase; EC 3.1.3.15 from Mycobacterium tuberculosis
P95189: histidinol-phosphatase (EC 3.1.3.15) from Mycobacterium tuberculosis

30% id,
95% cov

More...

hisB HHAL_RS05580 Hhal_1094 WP_011813893.1: imidazoleglycerol-phosphate dehydratase HisB
is similar to:
PaperBLAST

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

52% id,
53% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

52% id,
53% cov

HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale

47% id,
51% cov

More...

serB HHAL_RS08035 Hhal_1598 WP_041595115.1: phosphoserine phosphatase SerB
is similar to:
PaperBLAST

HP15_461: Histidinol-phosphatase (EC:3.1.3.15) from Marinobacter adhaerens

24% id,
95% cov

gmhB HHAL_RS06220 Hhal_1222 WP_011814020.1: D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase
is similar to:
PaperBLAST

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

31% id,
39% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

31% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1327277-1327918 (frame +2) on NC_008789.1 Halorhodospira halophila SL1, complete sequence
is similar to:
PaperBLAST

HIS7_SPILD / D2QPE6: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Spirosoma linguale
Also see hits to annotated proteins above

28% id,
46% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory