Curated BLAST for Genomes

 

Curated BLAST

Searching in Halorhodospira halophila SL1 (GCF_000015585.1)

Found 2 curated entries in PaperBLAST's database that match 'acetohydroxy acid synthase%large' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Halorhodospira halophila SL1, or try another query

ilvB HHAL_RS08015 Hhal_1594 WP_011814380.1: biosynthetic-type acetolactate synthase large subunit
is similar to:
PaperBLAST

ilvB / AAL99356.1: acetohydroxy acid synthase large subunit from Geobacillus stearothermophilus

43% id,
97% cov

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

40% id,
97% cov

menD HHAL_RS05750 Hhal_1127 WP_011813926.1: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
is similar to:
PaperBLAST

ilvB / AAV52901.1: acetohydroxy acid synthase large subunit from Streptomyces cinnamonensis

26% id,
52% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory