Curated BLAST for Genomes

 

Curated BLAST

Searching in Halorhodospira halophila SL1 (GCF_000015585.1)

Found 6 curated entries in PaperBLAST's database that match 'acetohydroxy-acid synthase%large' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Halorhodospira halophila SL1, or try another query

ilvB HHAL_RS08015 Hhal_1594 WP_011814380.1: biosynthetic-type acetolactate synthase large subunit
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

43% id,
99% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

41% id,
95% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

39% id,
95% cov

More...

menD HHAL_RS05750 Hhal_1127 WP_011813926.1: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
is similar to:
PaperBLAST

ILVG_ECOLI / P0DP90: Acetolactate synthase isozyme 2 large subunit; AHAS-II; ALS-II; Acetohydroxy-acid synthase II large subunit; EC 2.2.1.6 from Escherichia coli

27% id,
59% cov

ilvB / O08353: acetohydroxy-acid synthase large subunit (EC 2.2.1.6) from Methanococcus aeolicus

25% id,
53% cov

ILVB1_MYCTU / P9WG41: Acetolactate synthase large subunit IlvB1; ALS; Acetohydroxy-acid synthase large subunit; AHAS; EC 2.2.1.6 from Mycobacterium tuberculosis

26% id,
43% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory