Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylibium petroleiphilum PM1 (GCF_000015725.1)

Found 105 curated entries in PaperBLAST's database that match '1.2.1.3' as complete word(s).

These curated entries have 88 distinct sequences.

Running ublast with E ≤ 0.01

Found 16 relevant proteins in Methylibium petroleiphilum PM1, or try another query

MPE_RS10400 Mpe_A2064 WP_011829657.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:		 PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

 75% id,
99% cov

adh MPE_RS03015 Mpe_A0599 WP_011828199.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

ALDH_PARDP / A1B4L2: Aldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.3 from Paracoccus denitrificans
adh / A1B4L2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Paracoccus denitrificans

 74% id,
99% cov

Psest_2276: Aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas stutzeri

 71% id,
100% cov

Q4F895: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rhodococcus erythropolis

 71% id,
99% cov

More...

MPE_RS11735 Mpe_A2324 WP_011829917.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

 57% id,
91% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

 38% id,
98% cov

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

 38% id,
98% cov

More...

MPE_RS09615 Mpe_A1909 WP_011829504.1: aldehyde dehydrogenase
is similar to:		 PaperBLAST

ALDH_DAVTA / P40108: Aldehyde dehydrogenase; ALDDH; ALDH; Allergen Cla h 3; Allergen Cla h III; Allergen Cla h 10; EC 1.2.1.3 from Davidiella tassiana

 43% id,
95% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

 43% id,
96% cov

ALDH2_HUMAN / P05091: Aldehyde dehydrogenase, mitochondrial; ALDH class 2; ALDH-E2; ALDHI; EC 1.2.1.3 from Homo sapiens
ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens
P05091: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Homo sapiens

 45% id,
91% cov

More...

MPE_RS11480 Mpe_A2275 WP_011829868.1: 2-hydroxymuconic semialdehyde dehydrogenase
is similar to:		 PaperBLAST

Q9H2A2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aminomuconate-semialdehyde dehydrogenase (EC 1.2.1.32) from Homo sapiens

 42% id,
98% cov

Q8BH00: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

 40% id,
98% cov

ALDH_DAVTA / P40108: Aldehyde dehydrogenase; ALDDH; ALDH; Allergen Cla h 3; Allergen Cla h III; Allergen Cla h 10; EC 1.2.1.3 from Davidiella tassiana

 41% id,
95% cov

More...

MPE_RS12990 Mpe_A2577 WP_011830162.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

 38% id,
99% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

 40% id,
95% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

 40% id,
95% cov

More...

aldA MPE_RS01830 Mpe_A0361 WP_011827962.1: aldehyde dehydrogenase
is similar to:		 PaperBLAST

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

 40% id,
94% cov

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

 39% id,
94% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

 39% id,
94% cov

More...

MPE_RS17810 Mpe_A3524 WP_011831097.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

 35% id,
94% cov

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

 33% id,
97% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

 33% id,
97% cov

More...

MPE_RS21935 Mpe_B0496 WP_011831821.1: alcohol dehydrogenase catalytic domain-containing protein
is similar to:		 PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

 31% id,
99% cov

MPE_RS04090 Mpe_A0820 WP_011828420.1: alcohol dehydrogenase
is similar to:		 PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

 31% id,
99% cov

MPE_RS21955 Mpe_B0500 WP_011831825.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

A9KN57: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Lachnoclostridium phytofermentans

 31% id,
91% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

 38% id,
54% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

 38% id,
54% cov

More...

MPE_RS04675 Mpe_A0936 WP_011828536.1: NAD(P)-dependent alcohol dehydrogenase
is similar to:		 PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

 27% id,
96% cov

MPE_RS07060 Mpe_A1400 WP_011828999.1: NAD(P)H-quinone oxidoreductase
is similar to:		 PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

 32% id,
52% cov

MPE_RS18480 Mpe_A3657 WP_011831230.1: iron-containing alcohol dehydrogenase
is similar to:		 PaperBLAST

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

 30% id,
43% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

 30% id,
43% cov

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

 28% id,
35% cov

MPE_RS09055 Mpe_A1798 WP_011829394.1: iron-containing alcohol dehydrogenase
is similar to:		 PaperBLAST

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

 26% id,
46% cov

MPE_RS16800 Mpe_A3328 WP_011830902.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

ALDH2_HUMAN / P05091: Aldehyde dehydrogenase, mitochondrial; ALDH class 2; ALDH-E2; ALDHI; EC 1.2.1.3 from Homo sapiens
ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens
P05091: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Homo sapiens

 37% id,
19% cov

P47738: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

 37% id,
19% cov

P11884: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Rattus norvegicus

 36% id,
19% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 17 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2494640-2496187 (frame +2) on NC_008825.1 Methylibium petroleiphilum PM1, complete sequence
is similar to:		 PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus
Also see hits to annotated proteins above

 55% id,
97% cov

P30837: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Homo sapiens
Also see hits to annotated proteins above

 37% id,
99% cov

2749544-2751298 (frame +2) on NC_008825.1 Methylibium petroleiphilum PM1, complete sequence
is similar to:		 PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis
Also see hits to annotated proteins above

 39% id,
97% cov

ALD4 / P46367: potassium-activated aldehyde dehydrogenase, mitochondrial (EC 1.2.1.4; EC 1.2.1.3) from Saccharomyces cerevisiae
Also see hits to annotated proteins above

 35% id,
98% cov

AL7A1_RAT / Q64057: Alpha-aminoadipic semialdehyde dehydrogenase; Alpha-AASA dehydrogenase; Aldehyde dehydrogenase family 7 member A1; Antiquitin-1; Betaine aldehyde dehydrogenase; Delta1-piperideine-6-carboxylate dehydrogenase; P6c dehydrogenase; EC 1.2.1.31; EC 1.2.1.3; EC 1.2.1.8 from Rattus norvegicus
Also see hits to annotated proteins above

 24% id,
89% cov

More...

3533282-3533776 (frame -3) on NC_008825.1 Methylibium petroleiphilum PM1, complete sequence
is similar to:		 PaperBLAST

P47738: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus
Also see hits to annotated proteins above

 36% id,
25% cov

P11884: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Rattus norvegicus
Also see hits to annotated proteins above

 35% id,
25% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory