Curated BLAST for Genomes

 

Curated BLAST

Searching in Methylibium petroleiphilum PM1 (GCF_000015725.1)

Found 14 curated entries in PaperBLAST's database that match '1.2.1.39' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Methylibium petroleiphilum PM1, or try another query

adh MPE_RS03015 Mpe_A0599 WP_011828199.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

pedI / B1N7J6: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

 70% id,
100% cov

ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens

 41% id,
95% cov

BALDH_ANTMA / C7A2A0: Benzaldehyde dehydrogenase, mitochondrial; 2-phenylacetaldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.28; EC 1.2.1.39; EC 1.2.1.3 from Antirrhinum majus

 41% id,
90% cov

More...

MPE_RS09615 Mpe_A1909 WP_011829504.1: aldehyde dehydrogenase
is similar to:		 PaperBLAST

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

 43% id,
96% cov

ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens

 45% id,
91% cov

A0A0A7PB40: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Sphingopyxis fribergensis

 40% id,
100% cov

More...

MPE_RS11735 Mpe_A2324 WP_011829917.1: NAD-dependent succinate-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

 38% id,
98% cov

pdh / Q5P171: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Aromatoleum aromaticum
Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

 37% id,
98% cov

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

 35% id,
99% cov

More...

aldA MPE_RS01830 Mpe_A0361 WP_011827962.1: aldehyde dehydrogenase
is similar to:		 PaperBLAST

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

 38% id,
96% cov

pdh / Q5P171: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Aromatoleum aromaticum
Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

 38% id,
97% cov

A0A0A7PB40: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Sphingopyxis fribergensis

 38% id,
95% cov

More...

MPE_RS12990 Mpe_A2577 WP_011830162.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

 38% id,
96% cov

ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens

 37% id,
92% cov

pdh / Q5P171: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Aromatoleum aromaticum
Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

 35% id,
97% cov

More...

MPE_RS11480 Mpe_A2275 WP_011829868.1: 2-hydroxymuconic semialdehyde dehydrogenase
is similar to:		 PaperBLAST

peaE / B1N7H3: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Pseudomonas putida
B1N7H3: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

 38% id,
95% cov

A0A0A7PB40: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Sphingopyxis fribergensis

 37% id,
95% cov

BALDH_ANTMA / C7A2A0: Benzaldehyde dehydrogenase, mitochondrial; 2-phenylacetaldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.28; EC 1.2.1.39; EC 1.2.1.3 from Antirrhinum majus

 40% id,
88% cov

More...

MPE_RS17810 Mpe_A3524 WP_011831097.1: CoA-acylating methylmalonate-semialdehyde dehydrogenase
is similar to:		 PaperBLAST

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

 33% id,
96% cov

ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens

 33% id,
94% cov

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

 32% id,
95% cov

More...

MPE_RS21955 Mpe_B0500 WP_011831825.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

STYD_PSEFL / O06837: Phenylacetaldehyde dehydrogenase; PAD; EC 1.2.1.39 from Pseudomonas fluorescens
styD / O06837: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas fluorescens

 27% id,
55% cov

MPE_RS16800 Mpe_A3328 WP_011830902.1: aldehyde dehydrogenase family protein
is similar to:		 PaperBLAST

ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens

 37% id,
19% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

396935-398437 (frame -3) on NC_008825.1 Methylibium petroleiphilum PM1, complete sequence
is similar to:		 PaperBLAST

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
Also see hits to annotated proteins above

 37% id,
100% cov

ALDH2 / P05091: mitochondrial aldehyde dehydrogenase subunit (EC 1.2.1.3; EC 1.2.1.39) from Homo sapiens
Also see hits to annotated proteins above

 36% id,
98% cov

2435121-2436770 (frame -2) on NC_008825.1 Methylibium petroleiphilum PM1, complete sequence
is similar to:		 PaperBLAST

BALDH_ANTMA / C7A2A0: Benzaldehyde dehydrogenase, mitochondrial; 2-phenylacetaldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.28; EC 1.2.1.39; EC 1.2.1.3 from Antirrhinum majus
Also see hits to annotated proteins above

 37% id,
97% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory