Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)

Found 1 curated entries in PaperBLAST's database that match '1.1.1.377' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 16 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query

RSPH17029_RS05260 Rsph17029_1031 WP_011840755.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

35% id,
97% cov

fabG RSPH17029_RS05725 Rsph17029_1124 WP_011840816.1: 3-oxoacyl-ACP reductase FabG
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

34% id,
99% cov

RSPH17029_RS04240 Rsph17029_0834 WP_011840637.1: glucose 1-dehydrogenase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

33% id,
98% cov

RSPH17029_RS12125 Rsph17029_2402 WP_002720931.1: beta-ketoacyl-ACP reductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

34% id,
96% cov

RSPH17029_RS18310 Rsph17029_3622 WP_011842508.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

31% id,
98% cov

RSPH17029_RS13005 Rsph17029_2578 WP_011841759.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

31% id,
96% cov

RSPH17029_RS03825 Rsph17029_0751 WP_011840585.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

30% id,
98% cov

RSPH17029_RS07260 Rsph17029_1436 WP_011841012.1: 3-hydroxybutyrate dehydrogenase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

30% id,
97% cov

RSPH17029_RS18400 Rsph17029_3640 WP_011842525.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

29% id,
96% cov

RSPH17029_RS19030 Rsph17029_3764 WP_011842634.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

28% id,
97% cov

RSPH17029_RS20910 Rsph17029_4152 WP_011840077.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

28% id,
98% cov

RSPH17029_RS09145 Rsph17029_1808 WP_009566244.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

28% id,
96% cov

RSPH17029_RS08755 Rsph17029_1731 WP_011841205.1: L-iditol 2-dehydrogenase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

28% id,
96% cov

RSPH17029_RS13805 Rsph17029_2736 WP_002721443.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

26% id,
95% cov

RSPH17029_RS17325 Rsph17029_3439 WP_002723138.1: SDR family oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

27% id,
90% cov

RSPH17029_RS13875 Rsph17029_2750 WP_011338706.1: SDR family NAD(P)-dependent oxidoreductase
is similar to:
PaperBLAST

RHAD_THEAC / Q9HK58: L-rhamnose 1-dehydrogenase (NADP(+)); RHAD; EC 1.1.1.377 from Thermoplasma acidophilum

23% id,
97% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 15 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory