Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)

Found 14 curated entries in PaperBLAST's database that match '1.5.1.34' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query

RSPH17029_RS20415 Rsph17029_4043 WP_080517388.1: SDR family oxidoreductase
is similar to:
PaperBLAST

DHPR_HUMAN / P09417: Dihydropteridine reductase; HDHPR; Quinoid dihydropteridine reductase; Short chain dehydrogenase/reductase family 33C member 1; EC 1.5.1.34 from Homo sapiens
QDPR / P09417: Dihydropteridine reductase (EC 1.5.1.34) from Homo sapiens
P09417: 6,7-dihydropteridine reductase (EC 1.5.1.34) from Homo sapiens

26% id,
68% cov

DHPR_RAT / P11348: Dihydropteridine reductase; HDHPR; Quinoid dihydropteridine reductase; EC 1.5.1.34 from Rattus norvegicus

27% id,
62% cov

Q8MJ30: 6,7-dihydropteridine reductase (EC 1.5.1.34) from Sus scrofa

27% id,
61% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1190057-1190740 (frame +2) on NC_009050.1 Cereibacter sphaeroides ATCC 17029 chromosome 2, complete sequence
is similar to:
PaperBLAST

DHPR_HUMAN / P09417: Dihydropteridine reductase; HDHPR; Quinoid dihydropteridine reductase; Short chain dehydrogenase/reductase family 33C member 1; EC 1.5.1.34 from Homo sapiens
QDPR / P09417: Dihydropteridine reductase (EC 1.5.1.34) from Homo sapiens
P09417: 6,7-dihydropteridine reductase (EC 1.5.1.34) from Homo sapiens
Also see hits to annotated proteins above

27% id,
72% cov

DHPR_RAT / P11348: Dihydropteridine reductase; HDHPR; Quinoid dihydropteridine reductase; EC 1.5.1.34 from Rattus norvegicus
Also see hits to annotated proteins above

28% id,
65% cov

Q8MJ30: 6,7-dihydropteridine reductase (EC 1.5.1.34) from Sus scrofa
Also see hits to annotated proteins above

27% id,
65% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory