Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)

Found 64 curated entries in PaperBLAST's database that match '2.4.2.1' as complete word(s).

These curated entries have 45 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query

RSPH17029_RS02465 Rsph17029_0486 WP_011840388.1: S-methyl-5'-thioadenosine phosphorylase
is similar to:		 PaperBLAST

flB / Q1EMV9: 5'-fluoro-5'-deoxy-adenosine phosphorylase (EC 2.4.2.1) from Streptantibioticus cattleyicolor

 54% id,
90% cov

Q97W94: purine-nucleoside phosphorylase (EC 2.4.2.1); S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Saccharolobus solfataricus

 45% id,
98% cov

pnp / Q5JEQ6: adenosine phosphorylase (EC 2.4.2.1) from Thermococcus kodakarensis

 45% id,
97% cov

More...

RSPH17029_RS04490 Rsph17029_0882 WP_011840662.1: purine-nucleoside phosphorylase
is similar to:		 PaperBLAST

A0A3G5E8S8: purine-nucleoside phosphorylase (EC 2.4.2.1) from Aneurinibacillus migulanus

 43% id,
99% cov

XAPA_ECOLI / P45563: Purine nucleoside phosphorylase 2; Inosine-guanosine phosphorylase; Purine nucleoside phosphorylase II; PNP II; Xanthosine phosphorylase; EC 2.4.2.1 from Escherichia coli
PndA / b2407: xanthosine phosphorylase (EC 2.4.2.1; EC 2.4.2.15) from Escherichia coli
xapA / P45563: xanthosine phosphorylase (EC 2.4.2.1; EC 2.4.2.15) from Escherichia coli

 46% id,
90% cov

PUNA_GEOSE / P77834: Purine nucleoside phosphorylase 1; PNP 1; Inosine phosphorylase; Inosine-guanosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; Pu-NPase I; EC 2.4.2.1 from Geobacillus stearothermophilus
P77834: purine-nucleoside phosphorylase (EC 2.4.2.1) from Geobacillus stearothermophilus

 46% id,
89% cov

More...

tpiA RSPH17029_RS03035 Rsph17029_0598 WP_011840459.1: triose-phosphate isomerase
is similar to:		 PaperBLAST

P00941: purine-nucleoside phosphorylase (EC 2.4.2.1) from Homo sapiens

 42% id,
95% cov

pgeF RSPH17029_RS01175 Rsph17029_0230 WP_011840255.1: peptidoglycan editing factor PgeF
is similar to:		 PaperBLAST

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli

 43% id,
91% cov

PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron

 37% id,
91% cov

PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic

 36% id,
88% cov

More...

RSPH17029_RS01270 Rsph17029_0249 WP_011840267.1: phosphopentomutase
is similar to:		 PaperBLAST

A0A518Y5Z2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Helicobacter pylori

 47% id,
62% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory