Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)

Found 52 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 43 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query

RSPH17029_RS00265 Rsph17029_0052 WP_011840137.1: asparaginase
is similar to:
PaperBLAST

PGA1_c36210: L-asparaginase (EC 3.5.1.1) from Phaeobacter inhibens

64% id,
98% cov

W0KM71: asparaginase (EC 3.5.1.1) from Nocardiopsis alba

37% id,
93% cov

Q9RFN5: asparaginase (EC 3.5.1.1) from Rhizobium etli

35% id,
94% cov

More...

RSPH17029_RS22765 Rsph17029_3734 WP_049763422.1: isoaspartyl peptidase/L-asparaginase
is similar to:
PaperBLAST

CCNA_00096: asparaginase (EC 3.5.1.1) from Caulobacter crescentus

34% id,
97% cov

P37595: beta-aspartyl-peptidase (EC 3.4.19.5); asparaginase (EC 3.5.1.1) from Escherichia coli

44% id,
44% cov

ASGL1_DANRE / Q5BKW9: Isoaspartyl peptidase/L-asparaginase; Asparaginase-like protein 1; Beta-aspartyl-peptidase; Isoaspartyl dipeptidase; L-asparagine amidohydrolase; EC 3.4.19.5; EC 3.5.1.1 from Danio rerio

46% id,
42% cov

More...

RSPH17029_RS22770 WP_204247981.1: isoaspartyl peptidase/L-asparaginase
is similar to:
PaperBLAST

P37595: beta-aspartyl-peptidase (EC 3.4.19.5); asparaginase (EC 3.5.1.1) from Escherichia coli

49% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory