Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query

hutI RSPH17029_RS07985 Rsph17029_1578 WP_043828065.1: imidazolonepropionase
is similar to:
PaperBLAST

PGA1_c36350: Imidazolonepropionase (EC 3.5.2.7) from Phaeobacter inhibens

62% id,
97% cov

HUTI_AGRFC / Q8U8Z6: Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum
Q8U8Z6: imidazolonepropionase (EC 3.5.2.7) from Agrobacterium tumefaciens

63% id,
95% cov

Ga0059261_3964: Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis

59% id,
97% cov

More...

pyrC RSPH17029_RS13435 Rsph17029_2663 WP_011841808.1: dihydroorotase
is similar to:
PaperBLAST

Ga0059261_3964: Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis

25% id,
92% cov

RSPH17029_RS17835 Rsph17029_3532 WP_011842427.1: amidohydrolase
is similar to:
PaperBLAST

HUTI_AGRFC / Q8U8Z6: Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum
Q8U8Z6: imidazolonepropionase (EC 3.5.2.7) from Agrobacterium tumefaciens

23% id,
58% cov

HUTI_BACSU / P42084: Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis
P42084: imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis

28% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory