Curated BLAST for Genomes

 

Curated BLAST

Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)

Found 65 curated entries in PaperBLAST's database that match '3.5.3.1' as complete word(s).

These curated entries have 50 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query

rocF RSPH17029_RS06535 Rsph17029_1289 WP_011840922.1: arginase
is similar to:		 PaperBLAST

arcA / P14012: arginase subunit (EC 3.5.3.1) from Agrobacterium fabrum

 58% id,
94% cov

N515DRAFT_0348: Arginase (EC 3.5.3.1) from Dyella japonica

 45% id,
98% cov

Ac3H11_701: Arginase (EC 3.5.3.1) from Acidovorax sp.

 47% id,
82% cov

More...

RSPH17029_RS17500 Rsph17029_3474 WP_011842385.1: agmatinase
is similar to:		 PaperBLAST

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

 41% id,
89% cov

GDAH_MOUSE / A2AS89: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Mus musculus

 41% id,
85% cov

ARG2 / Q5UNS1: arginase (EC 3.5.3.1) from Solanum lycopersicum
Q5UNS1: arginase (EC 3.5.3.1) from Solanum lycopersicum

 30% id,
88% cov

More...

speB RSPH17029_RS07860 Rsph17029_1554 WP_011841097.1: agmatinase
is similar to:		 PaperBLAST

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

 41% id,
83% cov

GDAH_MOUSE / A2AS89: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Mus musculus

 39% id,
81% cov

ARGI1_HUMAN / P05089: Arginase-1; Liver-type arginase; Type I arginase; EC 3.5.3.1 from Homo sapiens
ARG1 / P05089: Arginase-1 (EC 3.5.3.1) from Homo sapiens
P05089: arginase (EC 3.5.3.1) from Homo sapiens

 29% id,
94% cov

More...

RSPH17029_RS17830 Rsph17029_3531 WP_011842426.1: hypothetical protein
is similar to:		 PaperBLAST

GDAH_MOUSE / A2AS89: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Mus musculus

 42% id,
17% cov

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

 41% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1334107-1335453 (frame -2) on NC_009049.1 Cereibacter sphaeroides ATCC 17029 chromosome 1, complete sequence
is similar to:		 PaperBLAST

arcA / P14012: arginase subunit (EC 3.5.3.1) from Agrobacterium fabrum
Also see hits to annotated proteins above

 57% id,
96% cov

Ac3H11_701: Arginase (EC 3.5.3.1) from Acidovorax sp.
Also see hits to annotated proteins above

 44% id,
92% cov

ARGI2_HUMAN / P78540: Arginase-2, mitochondrial; Arginase II; Kidney-type arginase; Non-hepatic arginase; Type II arginase; EC 3.5.3.1 from Homo sapiens
ARG2 / P78540: Arginase-2, mitochondrial (EC 3.5.3.1) from Homo sapiens
P78540: arginase (EC 3.5.3.1) from Homo sapiens
Also see hits to annotated proteins above

 39% id,
94% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory