Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)
Found 26 curated entries in PaperBLAST's database that match '4.1.1.20' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query
| lysA RSPH17029_RS12035 Rsph17029_2384 WP_011841628.1: diaminopimelate decarboxylase is similar to: | PaperBLAST |
Ga0059261_2051: diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingomonas koreensis | 52% id, 100% cov |
Q9KVL7: diaminopimelate decarboxylase (EC 4.1.1.20) from Vibrio cholerae | 51% id, 100% cov |
DCDA_HELPX / B4XMC6: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Helicobacter pylori | 42% id, 96% cov |
| RSPH17029_RS03580 Rsph17029_0701 WP_011840548.1: type III PLP-dependent enzyme is similar to: | PaperBLAST |
DCDA_METJA / Q58497: Diaminopimelate decarboxylase; DAP decarboxylase; DAPDC; EC 4.1.1.20 from Methanocaldococcus jannaschii | 23% id, 64% cov |
| RSPH17029_RS02525 Rsph17029_0498 WP_011337028.1: aspartate kinase is similar to: | PaperBLAST |
N515DRAFT_4002: aspartate kinase / diaminopimelate decarboxylase (EC 4.1.1.20; EC 2.7.2.4) from Dyella japonica | 27% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory