Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)
Found 10 curated entries in PaperBLAST's database that match '4.2.1.6' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query
| dgoD RSPH17029_RS18320 Rsph17029_3624 WP_011842510.1: galactonate dehydratase is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 73% id, 100% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 61% id, 100% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 50% id, 100% cov |
| RSPH17029_RS09155 Rsph17029_1810 WP_011841248.1: dihydroxy-acid dehydratase family protein is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 46% id, 92% cov |
| RSPH17029_RS18285 Rsph17029_3617 WP_011842504.1: dihydroxy-acid dehydratase family protein is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 46% id, 91% cov |
| RSPH17029_RS18080 Rsph17029_3574 WP_011842465.1: mandelate racemase/muconate lactonizing enzyme family protein is similar to: | PaperBLAST |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 32% id, 100% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 32% id, 100% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 33% id, 91% cov |
| RSPH17029_RS20915 Rsph17029_4153 WP_011840078.1: mandelate racemase/muconate lactonizing enzyme family protein is similar to: | PaperBLAST |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 29% id, 93% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 29% id, 91% cov |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 29% id, 88% cov |
| RSPH17029_RS18315 Rsph17029_3623 WP_011842509.1: mandelate racemase/muconate lactonizing enzyme family protein is similar to: | PaperBLAST |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 29% id, 92% cov |
BPHYT_RS16405: galactonate dehydratase [EC: 4.2.1.6] from Burkholderia phytofirmans | 29% id, 92% cov |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 28% id, 93% cov |
| edd RSPH17029_RS06605 Rsph17029_1303 WP_011840931.1: phosphogluconate dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 30% id, 85% cov |
| RSPH17029_RS20930 Rsph17029_4156 WP_011840081.1: mandelate racemase/muconate lactonizing enzyme family protein is similar to: | PaperBLAST |
G3Y8T6: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 25% id, 91% cov |
G3YE52: galactonate dehydratase (EC 4.2.1.6) from Aspergillus niger | 25% id, 91% cov |
DGOD_ECOLI / Q6BF17: D-galactonate dehydratase; GalD; EC 4.2.1.6 from Escherichia coli | 25% id, 86% cov |
| ilvD RSPH17029_RS19210 Rsph17029_3801 WP_011339020.1: dihydroxy-acid dehydratase is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 32% id, 58% cov |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 33% id, 47% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 929675-931570 (frame -3) on NC_009050.1 Cereibacter sphaeroides ATCC 17029 chromosome 2, complete sequence is similar to: | PaperBLAST |
ARAD_RHILW / B5ZZ34: L-arabinonate dehydratase; ArDHT; D-fuconate dehydratase; Galactonate dehydratase; L-arabonate dehydratase; EC 4.2.1.25; EC 4.2.1.67; EC 4.2.1.6 from Rhizobium leguminosarum | 31% id, 61% cov |
Lawrence Berkeley National Laboratory