Searching in Cereibacter sphaeroides ATCC 17029 (GCF_000015985.1)
Found 14 curated entries in PaperBLAST's database that match '4.2.3.4' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Cereibacter sphaeroides ATCC 17029, or try another query
| aroB RSPH17029_RS07475 Rsph17029_1478 WP_002719990.1: 3-dehydroquinate synthase is similar to: | PaperBLAST |
AROB_ECOLI / P07639: 3-dehydroquinate synthase; DHQS; EC 4.2.3.4 from Escherichia coli | 45% id, 99% cov |
Q3M4V2: 3-dehydroquinate synthase (EC 4.2.3.4) from Trichormus variabilis | 42% id, 100% cov |
P9WPX9: 3-dehydroquinate synthase (EC 4.2.3.4) from Mycobacterium tuberculosis | 41% id, 93% cov |
| RSPH17029_RS14595 Rsph17029_2895 WP_011841953.1: shikimate dehydrogenase is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 28% id, 17% cov |
| RSPH17029_RS07480 Rsph17029_1479 WP_017140213.1: shikimate kinase is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 30% id, 6% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory