Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanococcus maripaludis C5 (GCF_000016125.1)

Found 85 curated entries in PaperBLAST's database that match '2.3.1.16' as complete word(s).

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanococcus maripaludis C5, or try another query

MMARC5_RS01930 MmarC5_0378 WP_011868149.1: thiolase domain-containing protein
is similar to:
PaperBLAST

mvaE / A0A384E138: acetyl-CoA C-acetyltransferase (EC 2.3.1.16) from Methanothermococcus thermolithotrophicus

83% id,
100% cov

tioL / Q5P8S8: 3-oxoacyl CoA thiolase (EC 2.3.1.16) from Aromatoleum aromaticum

32% id,
97% cov

Q66Q58: acetyl-CoA C-acyltransferase (EC 2.3.1.16) from Spodoptera littoralis

33% id,
73% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory