Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanococcus maripaludis C5 (GCF_000016125.1)

Found 39 curated entries in PaperBLAST's database that match '2.6.1.57' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Methanococcus maripaludis C5, or try another query

MMARC5_RS08060 MmarC5_1580 WP_011869324.1: PLP-dependent aminotransferase family protein
is similar to:
PaperBLAST

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

44% id,
95% cov

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

34% id,
100% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

30% id,
99% cov

More...

MMARC5_RS02615 MmarC5_0517 WP_011868286.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

42% id,
98% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

41% id,
98% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

36% id,
89% cov

More...

ilvE MMARC5_RS07850 MmarC5_1546 WP_011869290.1: branched-chain-amino-acid transaminase
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

38% id,
91% cov

hisC MMARC5_RS01910 MmarC5_0374 WP_011868145.1: histidinol-phosphate transaminase
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

32% id,
97% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

26% id,
92% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

25% id,
96% cov

MMARC5_RS00255 MmarC5_0048 WP_011867827.1: LL-diaminopimelate aminotransferase
is similar to:
PaperBLAST

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

32% id,
96% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

30% id,
94% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

31% id,
93% cov

More...

MMARC5_RS00935 MmarC5_0182 WP_011867957.1: pyridoxal phosphate-dependent aminotransferase
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

28% id,
87% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

30% id,
79% cov

ArAT1 / D7F4K3: aromatic amino acid transaminase (EC 2.6.1.1; EC 2.6.1.57) from Cucumis melo

22% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory