Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanococcus maripaludis C5 (GCF_000016125.1)

Found 17 curated entries in PaperBLAST's database that match '2.7.2.2' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanococcus maripaludis C5, or try another query

pyrH MMARC5_RS06340 MmarC5_1253 WP_011869003.1: UMP kinase
is similar to:
PaperBLAST

A6LPA8: carbamate kinase (EC 2.7.2.2) from Thermosipho melanesiensis

25% id,
45% cov

A0A0H3BY05: carbamate kinase (EC 2.7.2.2) from Streptococcus pyogenes

24% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory