Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanococcus maripaludis C5 (GCF_000016125.1)

Found 7 curated entries in PaperBLAST's database that match '4.3.1.12' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanococcus maripaludis C5, or try another query

MMARC5_RS01900 MmarC5_0372 WP_011868143.1: TIGR00300 family protein
is similar to:
PaperBLAST

agrE / Q8YMD9: arginine dihydrolase/ornithine cyclodeaminase (EC 4.3.1.12) from Nostoc sp.

43% id,
58% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory