Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanococcus maripaludis C5 (GCF_000016125.1)

Found 6 curated entries in PaperBLAST's database that match '6.1.1.24' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Methanococcus maripaludis C5, or try another query

MMARC5_RS02955 MmarC5_0583 WP_011868351.1: glutamate--tRNA ligase
is similar to:
PaperBLAST

P00962: glutamine-tRNA ligase (EC 6.1.1.18); glutamate-tRNAGln ligase (EC 6.1.1.24) from Escherichia coli

29% id,
91% cov

Q9X2I8: glutamate-tRNAGln ligase (EC 6.1.1.24) from Thermotoga maritima

31% id,
76% cov

Q8IDD3: glutamate-tRNAGln ligase (EC 6.1.1.24) from Plasmodium falciparum

26% id,
78% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory