Curated BLAST for Genomes

 

Curated BLAST

Searching in Methanococcus maripaludis C5 (GCF_000016125.1)

Found 1 curated entries in PaperBLAST's database that match 'glutamyl-tRNA(Gln) amidotransferase subunit E' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Methanococcus maripaludis C5, or try another query

gatE MMARC5_RS01665 MmarC5_0325 WP_011868096.1: Glu-tRNA(Gln) amidotransferase subunit GatE
is similar to:
PaperBLAST

gatE / O26803: glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.7) from Methanothermobacter thermautotrophicus

51% id,
100% cov

gatB MMARC5_RS03800 MmarC5_0753 WP_011868517.1: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
is similar to:
PaperBLAST

gatE / O26803: glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.7) from Methanothermobacter thermautotrophicus

30% id,
32% cov

gatE / O26803: glutamyl-tRNA(Gln) amidotransferase subunit E (EC 6.3.5.7) from Methanothermobacter thermautotrophicus

55% id,
6% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory